As was discussed in a different question here on SE (link) if you compute eigenvalues numerically of a matrix which depends on a parameter y
, the resulting plot of the eigenvalues will yield non-smooth plots. Assuming that I know that my eigenvalues will transform smoothly under the change of y
I would like to reorder them, so that when I plot them the color coding is correct.
Secondly I would also like to apply the reordering to the eigenvectors as I would like to have a look at how they transform under changes of y
, too.
In this link george2079 does already partially answer my question by applying a minimization procedure which punishes large curvature via a cost function. However, I have trouble adapting it to my situation and I am not sure if this is the best approach (so if you have a better idea feel free to post it as an answer).
My Matrix:
m = {{-0.576 Cos[y], 0, 0, 0. + 0.06 I, 0, 0.369858, 0, 0, 0, 0, -0.0906385, 0, 0, -0.265868, 0.0366083, 0.0157771, -0.185737, 0.0349767, 0.0435434, -0.276945, (0.288 - 0.498831 I) Sin[y], 0. - 0.03 I, 0.03, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0}, {0, -0.576 Cos[y], 0. - 0.03 I, 0, 0, 0, -0.170921, 0, 0, 0, 0, 0.234664, 0.234164, 0, 0, -0.185737, 0.205344, -0.239136, -0.249447, 0.143353, 0. + 0.03 I, (0.288 - 0.498831 I) Sin[y], 0, -0.03, 0.0519615, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0}, {0, 0. + 0.03 I, -0.576 Cos[y], 0, 0, 0, 0, 0.369858, 0, 0, 0, 0.234164, -0.0357261, 0, 0, 0.0349767, -0.239136, -0.0707859, 0.185737, 0.248295, -0.03, 0, (0.288 - 0.498831 I) Sin[y], 0. - 0.03 I, 0. - 0.0519615 I, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0}, {0. - 0.06 I, 0, 0, -0.576 Cos[y], 0, 0, 0, 0, -0.244138, -0.0422717, -0.265868, 0, 0, 0.216359, 0.0211358, 0.0435434, -0.249447, 0.185737, 0.0660567, 0.159894, 0, 0.03, 0. + 0.03 I, (0.288 - 0.498831 I) Sin[y], 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0}, {0, 0, 0, 0, -0.576 Cos[y], 0, 0, 0, -0.0422717, -0.195326, 0.0366083, 0, 0, 0.0211358, -0.195326, -0.276945, 0.143353, 0.248295, 0.159894, 0.293945, 0, -0.0519615, 0. + 0.0519615 I, 0, (0.288 - 0.498831 I) Sin[y], 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0}, {0.369858, 0, 0, 0, 0, -0.576 Cos[y], 0, 0, 0. + 0.06 I, 0, -0.0906385, 0, 0, 0.265868, -0.0366083, 0.0157771, 0.185737, 0.0349767, -0.0435434, 0.276945, 0, 0, 0, 0, 0, (0.288 + 0.498831 I) Sin[y], 0. - 0.03 I, 0.03, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0}, {0, -0.170921, 0, 0, 0, 0, -0.576 Cos[y], 0. - 0.03 I, 0, 0, 0, 0.234664, -0.234164, 0, 0, 0.185737, 0.205344, 0.239136, -0.249447, 0.143353, 0, 0, 0, 0, 0, 0. + 0.03 I, (0.288 + 0.498831 I) Sin[y], 0, -0.03, 0.0519615, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0}, {0, 0, 0.369858, 0, 0, 0, 0. + 0.03 I, -0.576 Cos[y], 0, 0, 0, -0.234164, -0.0357261, 0, 0, 0.0349767, 0.239136, -0.0707859, -0.185737, -0.248295, 0, 0, 0, 0, 0, -0.03, 0, (0.288 + 0.498831 I) Sin[y], 0. - 0.03 I, 0. - 0.0519615 I, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0}, {0, 0, 0, -0.244138, -0.0422717, 0. - 0.06 I, 0, 0, -0.576 Cos[y], 0, 0.265868, 0, 0, 0.216359, 0.0211358, -0.0435434, -0.249447, -0.185737, 0.0660567, 0.159894, 0, 0, 0, 0, 0, 0, 0.03, 0. + 0.03 I, (0.288 + 0.498831 I) Sin[y], 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0}, {0, 0, 0, -0.0422717, -0.195326, 0, 0, 0, 0, -0.576 Cos[y], -0.0366083, 0, 0, 0.0211358, -0.195326, 0.276945, 0.143353, -0.248295, 0.159894, 0.293945, 0, 0, 0, 0, 0, 0, -0.0519615, 0. + 0.0519615 I, 0, (0.288 + 0.498831 I) Sin[y], 0, 0, 0, 0, 0, 0, 0, 0, 0, 0}, {-0.0906385, 0, 0, -0.265868, 0.0366083, -0.0906385, 0, 0, 0.265868, -0.0366083, -0.576 Cos[y], 0, 0, 0. + 0.06 I, 0, 0.0911964, 0, 0.356683, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -0.576 Sin[y], 0. - 0.03 I, 0.03, 0, 0, 0, 0, 0, 0, 0}, {0, 0.234664, 0.234164, 0, 0, 0, 0.234664, -0.234164, 0, 0, 0, -0.576 Cos[y], 0. - 0.03 I, 0, 0, 0, -0.208851, 0, 0.0722586, -0.286706, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0. + 0.03 I, -0.576 Sin[y], 0, -0.03, 0.0519615, 0, 0, 0, 0, 0}, {0, 0.234164, -0.0357261, 0, 0, 0, -0.234164, -0.0357261, 0, 0, 0, 0. + 0.03 I, -0.576 Cos[y], 0, 0, 0.356683, 0, 0.343409, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -0.03, 0, -0.576 Sin[y], 0. - 0.03 I, 0. - 0.0519615 I, 0, 0, 0, 0, 0}, {-0.265868, 0, 0, 0.216359, 0.0211358, 0.265868, 0, 0, 0.216359, 0.0211358, 0. - 0.06 I, 0, 0, -0.576 Cos[y], 0, 0, 0.0722586, 0, -0.00936269, -0.319789, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.03, 0. + 0.03 I, -0.576 Sin[y], 0, 0, 0, 0, 0, 0}, {0.0366083, 0, 0, 0.0211358, -0.195326, -0.0366083, 0, 0, 0.0211358, -0.195326, 0, 0, 0, 0, -0.576 Cos[y], 0, -0.286706, 0, -0.319789, 0.293945, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -0.0519615, 0. + 0.0519615 I, 0, -0.576 Sin[y], 0, 0, 0, 0, 0}, {0.0157771, -0.185737, 0.0349767, 0.0435434, -0.276945, 0.0157771, 0.185737, 0.0349767, -0.0435434, 0.276945, 0.0911964, 0, 0.356683, 0, 0, 1.02645, 0, 0, 0. + 0.53 I, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0. - 0.265 I, 0.265, 0, 0}, {-0.185737, 0.205344, -0.239136, -0.249447, 0.143353, 0.185737, 0.205344, 0.239136, -0.249447, 0.143353, 0, -0.208851, 0, 0.0722586, -0.286706, 0, 1.02645, 0. - 0.265 I, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0. + 0.265 I, 0, 0, -0.265, 0.458993}, {0.0349767, -0.239136, -0.0707859, 0.185737, 0.248295, 0.0349767, 0.239136, -0.0707859, -0.185737, -0.248295, 0.356683, 0, 0.343409, 0, 0, 0, 0. + 0.265 I, 1.02645, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -0.265, 0, 0, 0. - 0.265 I, 0. - 0.458993 I}, {0.0435434, -0.249447, 0.185737, 0.0660567, 0.159894, -0.0435434, -0.249447, -0.185737, 0.0660567, 0.159894, 0, 0.0722586, 0, -0.00936269, -0.319789, 0. - 0.53 I, 0, 0, 1.02645, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.265, 0. + 0.265 I, 0, 0}, {-0.276945, 0.143353, 0.248295, 0.159894, 0.293945, 0.276945, 0.143353, -0.248295, 0.159894, 0.293945, 0, -0.286706, 0, -0.319789, 0.293945, 0, 0, 0, 0, 1.02645, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -0.458993, 0. + 0.458993 I, 0, 0}, {(0.288 + 0.498831 I) Sin[y], 0. - 0.03 I, -0.03, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.576 Cos[y], 0, 0, 0. - 0.06 I, 0, 0.369858, 0, 0, 0, 0, -0.0906385, 0, 0, -0.265868, 0.0366083, 0.0157771, -0.185737, 0.0349767, 0.0435434, -0.276945}, {0. + 0.03 I, (0.288 + 0.498831 I) Sin[y], 0, 0.03, -0.0519615, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.576 Cos[y], 0. + 0.03 I, 0, 0, 0, -0.170921, 0, 0, 0, 0, 0.234664, 0.234164, 0, 0, -0.185737, 0.205344, -0.239136, -0.249447, 0.143353}, {0.03, 0, (0.288 + 0.498831 I) Sin[y], 0. - 0.03 I, 0. - 0.0519615 I, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0. - 0.03 I, 0.576 Cos[y], 0, 0, 0, 0, 0.369858, 0, 0, 0, 0.234164, -0.0357261, 0, 0, 0.0349767, -0.239136, -0.0707859, 0.185737, 0.248295}, {0, -0.03, 0. + 0.03 I, (0.288 + 0.498831 I) Sin[y], 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0. + 0.06 I, 0, 0, 0.576 Cos[y], 0, 0, 0, 0, -0.244138, -0.0422717, -0.265868, 0, 0, 0.216359, 0.0211358, 0.0435434, -0.249447, 0.185737, 0.0660567, 0.159894}, {0, 0.0519615, 0. + 0.0519615 I, 0, (0.288 + 0.498831 I) Sin[y], 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.576 Cos[y], 0, 0, 0, -0.0422717, -0.195326, 0.0366083, 0, 0, 0.0211358, -0.195326, -0.276945, 0.143353, 0.248295, 0.159894, 0.293945}, {0, 0, 0, 0, 0, (0.288 - 0.498831 I) Sin[y], 0. - 0.03 I, -0.03, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.369858, 0, 0, 0, 0, 0.576 Cos[y], 0, 0, 0. - 0.06 I, 0, -0.0906385, 0, 0, 0.265868, -0.0366083, 0.0157771, 0.185737, 0.0349767, -0.0435434, 0.276945}, {0, 0, 0, 0, 0, 0. + 0.03 I, (0.288 - 0.498831 I) Sin[y], 0, 0.03, -0.0519615, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -0.170921, 0, 0, 0, 0, 0.576 Cos[y], 0. + 0.03 I, 0, 0, 0, 0.234664, -0.234164, 0, 0, 0.185737, 0.205344, 0.239136, -0.249447, 0.143353}, {0, 0, 0, 0, 0, 0.03, 0, (0.288 - 0.498831 I) Sin[y], 0. - 0.03 I, 0. - 0.0519615 I, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.369858, 0, 0, 0, 0. - 0.03 I, 0.576 Cos[y], 0, 0, 0, -0.234164, -0.0357261, 0, 0, 0.0349767, 0.239136, -0.0707859, -0.185737, -0.248295}, {0, 0, 0, 0, 0, 0, -0.03, 0. + 0.03 I, (0.288 - 0.498831 I) Sin[y], 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -0.244138, -0.0422717, 0. + 0.06 I, 0, 0, 0.576 Cos[y], 0, 0.265868, 0, 0, 0.216359, 0.0211358, -0.0435434, -0.249447, -0.185737, 0.0660567, 0.159894}, {0, 0, 0, 0, 0, 0, 0.0519615, 0. + 0.0519615 I, 0, (0.288 - 0.498831 I) Sin[y], 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -0.0422717, -0.195326, 0, 0, 0, 0, 0.576 Cos[y], -0.0366083, 0, 0, 0.0211358, -0.195326, 0.276945, 0.143353, -0.248295, 0.159894, 0.293945}, {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -0.576 Sin[y], 0. - 0.03 I, -0.03, 0, 0, 0, 0, 0, 0, 0, -0.0906385, 0, 0, -0.265868, 0.0366083, -0.0906385, 0, 0, 0.265868, -0.0366083, 0.576 Cos[y], 0, 0, 0. - 0.06 I, 0, 0.0911964, 0, 0.356683, 0, 0}, {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0. + 0.03 I, -0.576 Sin[y], 0, 0.03, -0.0519615, 0, 0, 0, 0, 0, 0, 0.234664, 0.234164, 0, 0, 0, 0.234664, -0.234164, 0, 0, 0, 0.576 Cos[y], 0. + 0.03 I, 0, 0, 0, -0.208851, 0, 0.0722586, -0.286706}, {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.03, 0, -0.576 Sin[y], 0. - 0.03 I, 0. - 0.0519615 I, 0, 0, 0, 0, 0, 0, 0.234164, -0.0357261, 0, 0, 0, -0.234164, -0.0357261, 0, 0, 0, 0. - 0.03 I, 0.576 Cos[y], 0, 0, 0.356683, 0, 0.343409, 0, 0}, {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -0.03, 0. + 0.03 I, -0.576 Sin[y], 0, 0, 0, 0, 0, 0, -0.265868, 0, 0, 0.216359, 0.0211358, 0.265868, 0, 0, 0.216359, 0.0211358, 0. + 0.06 I, 0, 0, 0.576 Cos[y], 0, 0, 0.0722586, 0, -0.00936269, -0.319789}, {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.0519615, 0. + 0.0519615 I, 0, -0.576 Sin[y], 0, 0, 0, 0, 0, 0.0366083, 0, 0, 0.0211358, -0.195326, -0.0366083, 0, 0, 0.0211358, -0.195326, 0, 0, 0, 0, 0.576 Cos[y], 0, -0.286706, 0, -0.319789, 0.293945}, {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0. - 0.265 I, -0.265, 0, 0, 0.0157771, -0.185737, 0.0349767, 0.0435434, -0.276945, 0.0157771, 0.185737, 0.0349767, -0.0435434, 0.276945, 0.0911964, 0, 0.356683, 0, 0, 1.02645, 0, 0, 0. - 0.53 I, 0}, {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0. + 0.265 I, 0, 0, 0.265, -0.458993, -0.185737, 0.205344, -0.239136, -0.249447, 0.143353, 0.185737, 0.205344, 0.239136, -0.249447, 0.143353, 0, -0.208851, 0, 0.0722586, -0.286706, 0, 1.02645, 0. + 0.265 I, 0, 0}, {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.265, 0, 0, 0. - 0.265 I, 0. - 0.458993 I, 0.0349767, -0.239136, -0.0707859, 0.185737, 0.248295, 0.0349767, 0.239136, -0.0707859, -0.185737, -0.248295, 0.356683, 0, 0.343409, 0, 0, 0, 0. - 0.265 I, 1.02645, 0, 0}, {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, -0.265, 0. + 0.265 I, 0, 0, 0.0435434, -0.249447, 0.185737, 0.0660567, 0.159894, -0.0435434, -0.249447, -0.185737, 0.0660567, 0.159894, 0, 0.0722586, 0, -0.00936269, -0.319789, 0. + 0.53 I, 0, 0, 1.02645, 0}, {0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0.458993, 0. + 0.458993 I, 0, 0, -0.276945, 0.143353, 0.248295, 0.159894, 0.293945, 0.276945, 0.143353, -0.248295, 0.159894, 0.293945, 0, -0.286706, 0, -0.319789, 0.293945, 0, 0, 0, 0, 1.02645}}
(*empty line*)
ListPlot[Transpose@Table[Eigenvalues[m], {y, -Pi, Pi, .01}]]
Original code (m is a 3x3 matrix):
alle = Table[Eigenvalues[m], {y, -Pi, Pi, .01}];
original = Show[
MapIndexed[ListPlot[Flatten[Take[alle, All, {#}] , 2],
Joined -> True, PlotRange -> All,
PlotStyle -> Hue[First@#2/3]] &, Range[3]]];
v = Table[V[i], {i, Length[alle]}];
SetOptions[NMinimize, MaxIterations -> 500];
Do[
alle = MapThread[ Prepend[ Drop[ #2 , {#1}] , #2[[#1]] ] &,
{ (v /. Last@Minimize[{Total[((#[[1]] + #[[3]] - 2 #[[2]])^2 & /@
Partition[ Indexed @@@ Transpose[{alle, v}], 3, 1, {1, 3}, {}])],
Table[k <= V[i] <= 3, {i, Length[alle]}]}, v, Integers]) ,
alle}] , {k, 2}];
Show[original,
ListPlot[Flatten@Take[alle, All, {#}], Joined -> True,
PlotStyle -> {Thick, Black, Dashed}] & /@ Range[3]]
My adoption (m is my matrix):
alle = Table[Eigenvalues[m], {y, -Pi, Pi, .01}];
original = Show[
MapIndexed[ListPlot[Flatten[Take[alle, All, {#}] , 2],
Joined -> True, PlotRange -> All,
PlotStyle -> Hue[First@#2/40]] &, Range[40]]];
v = Table[V[i], {i, Length[alle]}];
SetOptions[NMinimize, MaxIterations -> 500];
Do[
alle = MapThread[ Prepend[ Drop[ #2 , {#1}] , #2[[#1]] ] &,
{ (v /. Last@Minimize[{Total[((#[[1]] + #[[3]] - 2 #[[2]])^2 & /@
Partition[ Indexed @@@ Transpose[{alle, v}], 40, 1, {1, 40}, {}])],
Table[k <= V[i] <= 40, {i, Length[alle]}]}, v, Integers]) ,
alle}] , {k, 40-1}];
Show[original,
ListPlot[Flatten@Take[alle, All, {#}], Joined -> True,
PlotStyle -> {Thick, Black, Dashed}] & /@ Range[40]]
My Questions:
Can someone explain george2079's code, because I still have trouble to figure out exactly what is going on?
What is the
v
table for?I understand the idea of the cost function but how is it used to reorder the eigenvalues?
- Is my adoption of the 3x3 example correct for my 40x40 example?
- How do I add my eigenvectors so that I still know at the end which eigenvectors belongs to which eigenvalue?
- Does the above code work on your system and if it does how long does the job take to finish?
- If it does not finish within reasonable time (for me that is < 40min): Is there a way to increase performance?
Note If you have a better idea how to solve my problem, this is of course also great. I am not bound in any way to use the above code.
y
in place. I have opened another question for that: mathematica.stackexchange.com/questions/83994/… $\endgroup$