The following expression $$\int_{0}^{t} f(t_0) \,dt_0 - \int_{0}^{t} f(t_1) \,dt_1 = 0$$ is zero because it is just a change of integration variable.
Why doesn't Mathematica give zero in this case?
Integrate[f[t1],{t1,0,t}]-Integrate[f[t2],{t2,0,t}]
simplify(int(f(t1),t1=0..t)-int(f(t2),t2=0..t))
gives zero. So I think you are right, Mathematica should give zero. I tried both Simplify and FullSimplify. !Mathematica graphics may be there a trick to make it simplify it to zero $\endgroup$