Questions tagged [parallelization]
Questions on parallel computing in Mathematica.
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Parallel XML import
I need to import some xml information from many pages. I have list of this pages. Doing it in single thread is too long. But I can't access multiple pages from the same IP at the same time. So I need ...
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0answers
13 views
Parallezation gives LaunchLocal::somefail
I was running a program using parallelization, and I got the following warning message:
LinkOpen::linke: No MathLink problem encountered..
SubKernels`LocalKernels`LaunchLocal::somefail: 1 ...
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0answers
54 views
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73 views
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22 views
Saving DownValues for a function computed in parallel
Is it possible to save DownValues of a function computed using a parallelization routine?
I have a rather costly function f I wish to evaluate at a grid and save ...
2
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2answers
165 views
Parallel Computing Problem [closed]
The program runs out quickly(30 seconds) if I don't do parallel.But when I replace Table with ParallelTable,the Program will keep running,no output results.
My code
https://privatebin.net/?...
5
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1answer
102 views
Which version of Mathematica did DiracDelta become to the derivative of HeavisideTheta from that of UnitStep?
The mathematica's version of my coworkers is 5.0, they use UnitStep to derive formula, However, I also want to use the parallel features so used the latest version ...
0
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1answer
40 views
Parallelizing nested for loops
I'm currently computing nested for loops.
I count up a few counting variables and compute a value for each set of counting variables, then that value is added to an array. It is a way of adding up ...
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0answers
31 views
Reading a chunk of data from a stream using Parallelization
I am trying to read a stream and perform some operations in parallel. Here is the logic of the code inside the ParallelDo:
1- Open stream
2- Read chunk of data
3- Close stream
4- Process the data
...
5
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1answer
524 views
1
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1answer
95 views
How to run multiple functions simultaneously by multi-core CPU in Windows?
There exist multiple functions, take them for instance, 3 functions as follows:
...
3
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1answer
45 views
PatternTest vs Parallelization
Bug introduced in 10.0 or earlier and fixed in 11.2
Consider the following function
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1answer
64 views
Parallelise numerical integral for contour plot
I have the following integral that I would like to evaluate:
...
5
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0answers
98 views
Optimize Use of PeakDetect in Mathematica
I am quite new to Mathematica and I am looking for some advice in order to improve and optimize my code.
Here is what I am trying to do:
Open a stream
Read the stream line by line and store it in "...
1
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0answers
41 views
Conversion of STL files to 3D Images
I am trying to convert some stl files to 3d images in MMA 11.3. I came across this post that contained some code making use of parallelization to speed up the process, as follows:
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0answers
35 views
How badly does switching kernel slow down or completely stop Mathematica running jobs?
I have a question on how to run two or more Mathematica jobs on one laptop. For example, I use a local kernel to run a job. Then I open another job and choose Kernel configuration option and choose ...
6
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1answer
66 views
How to properly Abort from within a ParallelMap?
If a condition is met within a sub-kernel in the function being mapped, how does one cancel the whole ParallelMap operation?
...
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0answers
40 views
Privilege violation for file or directory
hopefully somebody can help me out with the following;
I have a mathematica .wl script which uses ParallelTable;
When I run this locally (laptop) it works ...
0
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1answer
58 views
Update initial conditions recursively/sequentially within ParallelTable using NDSolve
I am modelling 3D motion of particles inside a force-field using second-order coupled PDEs, which I solve from time t=t0 to t=t1 with initial conditions x0,y0,z0. I have a total number of "particles" ...
3
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1answer
99 views
Why does choosing the method break the parallel computation? [closed]
I have a workable function with using NDSolve with predefined method for solving. But for some reasons I should use the parallel computation. The main problem is that the NDSolve can't build the ...
2
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1answer
65 views
ParallelMap vs building pure function on the fly
I have a case where one function builds a pure function whenever it is evaluated. A (admittedly contrived) example would be
...
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0answers
24 views
ParallelTable fails to finish evaluating after completing computation
I am executing a ParallelTable but the code fails to finish. This is the setup. f is a function.
...
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0answers
41 views
Clustering different kernel versions
After a good bit of trial and error I have managed to cluster together two OS X machines. The master is running Mathematica 9.0 and the secondary 11.0. All was well and good, the remote command being
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3
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1answer
338 views
Parallele Computing - 2 vs. 4 processor speed [closed]
I am evaluating a code which ends with Table having ParallelEvaluate of a function XXXX[phi, theta, si]. For a grid of 225 ...
1
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0answers
50 views
WSTP with an MPI application
I'm looking to use WSTP to make functions defined in a C MPI application available to a remote Mathematica kernel.
I've got this working for a non-MPI version of the application, but now wish to have ...
3
votes
1answer
52 views
How to trigger WhenEvent for NDSolve in parallel?
Say I have a system of differential equations that I need to solve for different initial conditions and say the process is sufficiently expensive and I have sufficiently many that I am calculating in ...
15
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2answers
234 views
DistributeDefinitions is evaluating the definitions, and this only for a large number of definitions
I am using Mathematica 11.3 and this seems to me to be a bug. I would like, if possible, some idea on a workaround.
Here is an example of a trivial code that works as expected:
...
4
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1answer
169 views
NDSolve`Iterate with shared variables
I'm trying to parallelize a set of NDSolves that share a few variables. Here is a short working example:
...
1
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1answer
36 views
Using ExternalEvaluate within ParallelDo
I have had great success using Python in Mathematica (for some computations for which there are very well optimised Python packages but not for Mathematica). I have some Mathematica functions that are ...
1
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1answer
81 views
Is there any way to save time using of “Cross” or “Table”?
I need to solve a equation by NDSlove, so I write the equation first, but it takes me a lot of time.
The follow is my code
...
0
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0answers
66 views
CUDAQ::internal: CUDALink experienced an internal error
I have Mathematica 11.0.0 installed on Windows 10, with an NVIDIA GT 630M GPU on my Dell Inspiron.
I am trying to run the CUDA examples in the Help files. All of the setup functions for CUDALink work ...
0
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0answers
34 views
Fail to modify the elements of a global vector in ParallelTable
I want to modify a vector in a Table function, such as
vec = {0, 0, 0, 0};
Table[vec[[i]] = i, {i, 1, 4}];
vec
// output {1,2,3,4}
however, when I use ...
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0answers
29 views
3
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1answer
56 views
ParallelDo gives different solution to Eigensystem
I am trying to calculate the eigensystem of a large matrix (e.g. 256x256). I have found that when I do this within a ParallelDo (because I am actually calculating many of these eigensystems), the ...
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80 views
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0answers
43 views
Properly parallelising FindRoot for multiple starting values
I have a problem I want to find numerical solutions for with different starting variables. Let F be a vector supposed to vanish, which in its definition includes ...
5
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0answers
78 views
Random number generation within Compile and Parallelization->True
According to this thread RandomChoice is a compilable function.
I use it to generate random numbers in a compiled function with parallelization enabled.
I wrote ...
4
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2answers
70 views
Shadowing of symbols with ParallelEvaluate and packages
I'm new to Mathematica's parallel evaluation and can't really figure out how to properly use packages on parallel kernels: I get ::shdw messages complaining about ...
2
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0answers
64 views
Whether Parallel computing or Gpu Computing can be performed for mathematica built-in functions? [closed]
I want to know how to run my mathematica code using GPU or parallel computing without any special coding besides using the original Mathematica code.
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1answer
94 views
Parallel Computation
How can I modify this code in order to run in parallel? (It's some part of my main code)
...
10
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1answer
94 views
Parallelize[MapIndexed[…,Association[…]]] returns broken result
Bug introduced in 10.0.2 or earlier and persisting through 12.0
Confirmed: CASE:4041910
Consider the following example:
...
5
votes
1answer
219 views
Parallelize the construction of sparse matrices
I'm trying to parallelize a few constructions of chain complexes (given as a list of sparse matrices). I have a function that for any column (or row) computes the list of nonzero entries in that ...
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0answers
43 views
Launching All Unoccupied Threads as Kernels [CPU Usage Assessment with Mathematica]
I'm working on a PC with 10 processor cores (20 threads), so it can support 20 concurrent computations. I often run simulations in the background on my PC such that some fraction of these, say 12, ...
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0answers
34 views
Writing to file with ParallelDo
I have been experiencing difficulties writing to file in MMA_11.3 when using ParallelDo.
The structure of the code is quite simple: a main script runs a ParallelDo block in which a function (...
3
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0answers
42 views
How can I prevent ParallelTable[] from freezing?
I have spent some time trying to figure this out.
I have a function that appears to be the reason my program is freezing. I am using both MemoryConstrained[] and <...
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0answers
27 views
Can't open setting of Parallel Kernel Configuration on Mac and Windows after configuring remote kernels
In Mathematica 11.3 on Mac and Windows.
Once I've set up the connection with gridMathemtaica's remote kernels. Then I close those machines/kernels and restart my Mathematica.
When I click the ...
4
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1answer
310 views
Parallelization does not use all cores fully
On a new laptop with a 6-core i7-8850H in Mma11.3, I'd like to use its full capabilities. Unicore code
...
2
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0answers
43 views
How can I deal with a SystemException?
I have a list of functions that are being evaluated, using ParallelTable[], and continue to get the error message:
...
2
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1answer
51 views
Compile command does not succeed with list input with Parallelization->True
J. M. suggested that I pose the following as a question, a matter arising in relation to the function probit:
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0
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0answers
138 views
ParallelTable::nopar: No parallel kernels available; proceeding with sequential evaluation
I am trying to use a the following code:
...
