Questions tagged [microscopy]

The tag has no usage guidance.

Filter by
Sorted by
Tagged with
1
vote
0answers
41 views

Mathematica for automatic image processing and quantification [closed]

I've been working on image analysis pipeline that involves a set of batch processing macros in ImageJ (for image segmentation) and data processing in Excel (VBA). I've got the process run in 4-5 ...
6
votes
1answer
180 views

How to track a deformable rod in video?

I have a video of nanotubes in solution taken with a confocal laser microscope. I typically track these nanotubes with Fiesta or Fiji, but in this case, there is variation in brightness that is ...
14
votes
1answer
251 views

Tracking cells as they move under a microscope

I have a video (tiff file) of cells under a microscope and I'd like to segment and track the location and sizes of them across time: It has a hundred frames: I've uploaded it here (now it is public):...