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Questions tagged [image3d]

Questions about Image3D, its relation to Graphics3D and other 3-dimensional image issues.

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1answer
32 views

Changing the length of the edge of the Polyhedron

Hope you're having a great day! I made another post in regard of how to insert an image onto a face of a Polyhedron. I hope you could help me on this one too! I want to change the length of the ...
1
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1answer
38 views

Modify each version of the Polyhedron with an Image

I'm new here, so I hope you're having a good day! I want to represent a Polyhedron with every face filled with my own Image of choice. Still, don't know how to do ...
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0answers
17 views

Revolution Issues

I'm trying to plot a surface of revolution but somehow when I do it the ends get cut off. Is there something wrong with my code? The graph looks fine when i graph it on a 2d plane.
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1answer
41 views

How to apply color function (e.g. Hue) to Image3D?

I have a 3d image data PlotData1, and I want to plot the Image3D with color. I tried this (Note: I don't have ...
2
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1answer
69 views

How to make an imported 3D Image look like X-Ray?

I have a human chest data as below:- ...
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2answers
68 views

Plot implicit region in 3D not working

I'm having troubles plotting an implicit region R (the full expression will be given at the end of this message for sake of readability). This implicit region R is defined by both inequalities and ...
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0answers
41 views

Conversion of STL files to 3D Images

I am trying to convert some stl files to 3d images in MMA 11.3. I came across this post that contained some code making use of parallelization to speed up the process, as follows: ...
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1answer
79 views

How do I crop a DXF file in Mathematica?

I need to make DXF files at a certain size and crop ratio. How can this be done in Mathematica? There is nothing in the docs that show it can be done. So I have no "starting point" In my ...
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0answers
104 views

Remove background image and redraw lines in black

I do not know if the title is correct. The image that I upload has liked me a lot because of the characteristic that no matter the angle it seems that it is looking at you, you could indicate me how ...
14
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2answers
249 views

3D Thinning algorithm in Mathematica

as far as I understood Thinning[] only works on 2D images thus far. Is there a library/piece of code that performs 3D Thinning in Mathematica? Max edit: I want ...
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0answers
30 views

Specifying different thickness for each graded contours of Mandelbrot Set so that I can export it as .STL file.

I am using Mandelbrot Set function in Mathematica to get the Mandelbrot plot. I want to 3d print this model, so want to specify thickness for each contour and then convert into .STL file. Is this ...
4
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1answer
114 views

Converting 3D graphics primitives to 3D image data

My goal is to produce a 3D dataset, from a scene of simple transformed shapes. The idea is that this data serves as a ground truth for some tomographic reconstruction problems. (For this, it is ...
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120 views

How do I overlay two images from Densityplot and ListDensityPlot?

I am trying to overlay two images as in the following (from here): I have a data in MS excel format here! (1) I want to select three columns for listdensityplot. This will serve as my background ...
2
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1answer
44 views

How to remove white margins of a rendered image of an Image3D object?

This question is related to this. In the case of Graphics3D, there is an option for Method->{"ShrinkWrap"->True}, however, ...
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0answers
66 views

Use List convolve for aligning images

I am trying to align images of point spread functions using a convolution. Before doing it on real data, I wanted to try on simulated data. I have no problem with the 1-D case where I create 2 ...
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2answers
77 views

Reproduce orthogonal images from 2d consecutive image set

I have 3474 images (png, 8bit, gey scale, horizontal size x=3107 pixels, vertical size y=1200 pixels). The images can be downloaded here: https://drive.google.com/open?id=1rK7xlbFIGMG4O3Z-...
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2answers
178 views

3D printing cardioid

I am hoping to 3D print some simple cardioid pictures, like the following: ...
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0answers
84 views

Saving in 2D and 3D in vectorial (pdf or svg) format

Good Day everybody, I have difficulties to save both 2D and 3D plots in vectorial format. I can get acceptable results if I save manually: righ-click on image, "Save Graphic as..." or "Print as...". ...
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0answers
46 views

What is a good source of public domain 3D images that can be imported into Mathematica?

I am interested in using some 3D images for a lesson I'm developing for kids, in which I want to show them various printouts of 2D cross-sections of the image and have them try to figure out what the ...
3
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2answers
86 views

How to combine density plot and a given image?

I have a sine plot and image, and I want to combine the two on 2D basis and 3D basis. I tried below:- ...
4
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1answer
91 views

How to add an image to the bottom of a ListPointPlot3D?

I am trying to plot the points of virus outbreak along time of 3 areas. I already have the data1, which have 3 columns: x-coordinate, y-coordinate and time. Then I ...
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0answers
25 views

Reading the color from a photo of a 3D object

While trying to cope with this problem, it came to me that I have no way of coloring the spikey correctly if I can't get to know the colors. The shapes could be easily judged, but the color gets ...
4
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1answer
193 views

Create 3D objects from 2D image and export as a 3D model

I want to create 3D objects from 2D image and export it as a "3ds" file (or "obj"). I tried: img=Import["https://i.imgur.com/orbbFG4.png"] ...
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0answers
121 views

How to implement a Cube 2: Sauerbraten octree?

I found this image of subdividing a cube based on octree model for the game "Cube 2: Sauerbraten octree". How can such an octree subdivision algorithm can be implemented? I also need a generalized ...
1
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1answer
141 views

Eliminate the black color of the “W” so that it is equal to the “S” using Mathematica?

I have searched the answers for a long time to help me with this but I can not find it. I tried to do with drawing programs but it looks good. How can I leave the "w" blank, respecting its shadows or ...
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1answer
31 views

The volume of the region enclosed around the Y-axis [duplicate]

The volume of the region enclosed by $x=y^{3}$, $x=0$, $y=2$, revolved around the Y-axis is? My question is, how would that solid be represented?
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2answers
117 views

The volume of the region enclosed by $x=y^3$, $x=0$, $y=2$ [duplicate]

The volume of the region enclosed by $x=y^{3}$, $x=0$, $y=2$, revolved around the X-axis is? My question is, how would that solid be represented?
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2answers
174 views

How to segment nuclei from a noisy image

(data can be downloaded from this link.) I am trying to segment and count nuclei in a noisy 3-D image stack and it is proving to be somewhat challenging. The strategy I could come up with requires ...
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2answers
121 views

Convert data from Image3D to ListPlot3D

Let's suppose I have created a 3d image of gray scale Images with: image3d = Image3D[Table[readImage[i], {i, numberOfImages}]]; and ...
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1answer
165 views

Image3D - plot physical axes scales

I have read in 600 thresholded gray scale images (located here - 14MB, png, 8bit, 300*200 pixel) into Image3D with: ...
4
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1answer
235 views

Image3D: Specify distance between image slices

When applying Image3D to an array of binary images, how can I specify the Z-depth between these images? Consider the RegionPlot3D of $x y z < 1$: ...
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0answers
224 views

How to dilate or erode a 3D geometry import with STL format?

I am a freshman to Mathematica. I just wonder if it is possible to dilate or erode directly the 3D geometry in STL format. I have tried to import a STL file and then used Dilation function. However, ...
6
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2answers
2k views

Create a 3D stack of 2D line plots [duplicate]

A simple concept but I've not been able to solve it. I'm trying to create a stack of 2D plots in 3D space using Mathematica 9. This is not a parametric plot, but I'm creating it from an array of ...
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1answer
103 views

Importing a large number of 2d DICOM images and generating a 3D image from them [closed]

I would like to construct a 3D image from 900 2D images in DICOM format in a folder. I am fairly new to mathematica and would greatly appreciate your help. I am currently using Mathematica 11. I used ...
13
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1answer
444 views

How can Mathematica be used to create a 3D Maze with text like this?

Interesting Graphic that creates a cool visual 3D maze which could possibly be done in Mathematica but I haven't seen an example in 3D. Assuming a Randomized Prim's algorithm will work for the maze ...
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0answers
101 views

Stereogram in Mathematica: inverse question

I've seen in this wonderful post that it's possible to create a stereogram in Mathematica. But I didn't found anything regardless the inverse problem. Given a stereogram, is possible to retrieve the ...
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1answer
128 views

Custom Ticks for Image3D?

Is it possible to make user-defined ticks in an Image3D? (Wizardly solutions will be appreciated, too.) With ...
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0answers
135 views

Bug in Image3D?

On a fresh kernel, in an empty notebook, I go directly to the docs of Image3D and evaluate one of the Basic Examples: ...
2
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1answer
211 views

Interpolate discrete points to create a 3D surface and highlight points

I have some discrete points in 3D: https://www.dropbox.com/s/syl7w3s30tc30b9/amycoo.xlsx?dl=0 I have the following problem: I want to create a 3D surface from those points and need to somehow ...
1
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1answer
180 views

Visualize 3D Vector Field in Voxels with Mask

Is there a way to view a vector field specified in voxels with a mask? I have three 3D arrays with $x,y,z$ components of the fields at each voxel, as well as a 3D array of booleans saying which ...
1
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1answer
109 views

How to customize the Color Function Editor?

I'm happy with Mathematica's inbuilt Colour Function Editor. However, I wish to add some extra functionalities to this to make it customised for my purpose. For example, I wish to manipulate the ...
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0answers
217 views

How to design a simple 1D transfer function for volume visualization? [closed]

Consider a volume (MRI Head) from (http://www9.informatik.uni-erlangen.de/External/vollib/). I wish to design a simple 1D Transfer Function which will assign/map each intensity value to a specific ...
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0answers
113 views

Creating a 3D mesh on an Image3D Figure

I have a stack of images that I compile with the Image3D function. The resulting figure is 360x360x93 pixels and named "X". My goal is to mesh the figure. I have defined points that correspond the ...
0
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1answer
86 views

I have a short CT video of a BuffaloFish and i need to manipluate the Frames from the video to make a 3D model of the animals skeleton [duplicate]

I know i need to use Image3D but other than that, im not exactly sure on where to start? https://youtu.be/yPTEs6jE6B4 heres a link to the video.
0
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1answer
143 views

How to draw a 3-dimensional sphere whose Head is Image3D?

In 2 dimensions, I can do like this to draw my image: Image[Graphics[{Circle[]}]] But in 3 dimensions, this method will give an error information: So I try ...
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0answers
230 views

3d Image reconstruction

I'm using Image3D to reconstruct a 3d image from over 800 2d slices. I'm able to create the image but takes too long to do anything useful with the 3d image. Even rotating the output freezes ...
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0answers
131 views

Challenge: Calulating The Resulting 2D Image Behind A Lens [closed]

This is a tough question! I would like to calculate how an image (a real 2D photograph) looks if I place a lens at a certain distance d1 from it and I observe it at a certain distance d2. It is ...
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0answers
58 views

Is there a substitute for the “Show” function to use within the Mathematica kernel?

I needed to implement a function to convert an object from Graphics3D to Image3D, basically a 3D version of rasterisation (I need the geometry in a discretised form). I used the method suggested by R....
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0answers
167 views

Creating 3D image from importing 2D images [closed]

I'm trying to recreate a 3D image from it's 2D slices. I have saved the 2D images as "image1, image2, etc". I've imported them this way: ...
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0answers
42 views

How to make 3D image of dynamic current image [duplicate]

How to make a 3D image of Dynamic[CurrentImage[]]? for example: ...