Questions tagged [image-processing]

Questions on the image processing capabilities implemented in Mathematica.

Filter by
Sorted by
Tagged with
1
vote
0answers
34 views

Mathematica for automatic image processing and quantification [closed]

I've been working on image analysis pipeline that involves a set of batch processing macros in ImageJ (for image segmentation) and data processing in Excel (VBA). I've got the process run in 4-5 ...
3
votes
1answer
72 views

Describe overlapping parts of an image with the fewest points

Lets say I have an image composed of 19x19 pixel red squares, each of which represents a single point (i.e. a plotmarker). I wish to obtain an estimate for the actual point each square represents, ...
0
votes
0answers
85 views

Using ImageGraphics in Mathematica [closed]

As a followup to my post here, I'd like to smooth the output of the image obtained from ImageGraphics. Input image is the following ...
14
votes
3answers
329 views

Importing a grid of numbers from an image (sudoku like)

Can anyone see a way to import a grid of numbers from http://www.mit.edu/~puzzle/2019/puzzle/lantern_festival.html into Mathematica? TextRecognize doesn't seem ...
1
vote
0answers
70 views

Trouble reading FITS with Mathematica 12

I've been using Mathematica to process FITS for years, but it has changed in version 12. Import now yields an Association rather ...
4
votes
0answers
177 views

Image-based reinforcement learning with neural networks

After seeing that "OpenAIGym" is not exactly supported on Windows and playing around with https://www.wolfram.com/language/12/neural-network-framework/train-an-...
1
vote
0answers
66 views

Finding bubbles in an image

I have several images which show bubbles in water. The task is to identify these bubbles, to count and measure them. I know this is not easy. 100% accuracy is not needed. The best I have so far is ...
1
vote
1answer
73 views

Track the location of of dot from noisy image

https://imgur.com/a/SnTYESG (subtraction between the image) https://imgur.com/a/ZdOS5wf (orignal image) From the original image, since my CCD camera is bad, I cannot really see anything. However, ...
1
vote
1answer
40 views

List of all points on the edges of the image

What is a easy and fast way to get a list of all points on the edges of the following image ? img = Import["https://imgur.com/1sAtNOk.png"] I tried to using the ...
3
votes
1answer
119 views

Good book on image processing and analysis on Mathematica 12

Can someone recommend a good book on image processing/analysis and graphics on Mathematica 12?
0
votes
0answers
30 views

Setting the location of the origin within an image for AffineTransformation

This question is closely related to this one, but slightly different. I want to perform several AffineTransforms on an image (myImage). For example, here is a ...
7
votes
2answers
76 views

UpdateInterval doesn't work with Dynamic[CurrentImage]

I work on image processing using images from webcams. It's connected via USB and I get "live" images by: Dynamic[Refresh[CurrentImage[], UpdateInterval->5]] ...
2
votes
1answer
36 views

What's wrong with my masking in this ImageMeasurements?

I want to find the mean color of an image's region defined by a polygon, and I tried this: ...
0
votes
0answers
63 views

How to extract numerical data from plot images automatically?

how can we automatically extract numerical data from plot images in MMA (.dat or .csv file)? For the test image (two curves in one image), x=[0 40]; y=[0 1] if we use e.g. "getdata-graph-digitizer" ...
3
votes
2answers
134 views

Find gridlines in image of blots arranged in a grid

I have an image with a grid of equal separations. I would like to detect the lines in this image. I tried with ImageLines in but it does not work. @MelaGo Thank ...
4
votes
2answers
161 views

Extract partitions of images after edge detection

Given a edge detected image like this: I would like to extract each character into a sub-image, i.e so that each new picture only have one character. Is there a simple way of doing this in ...
2
votes
1answer
65 views

Hammer projection to rectangular

This might be more of a mathematical problem than a Mathematica'l one, but still, maybe you'd help me. I want to write a function that would produce a rectangular image from an image with Hammer ...
2
votes
1answer
84 views

How to make a video from png images

I have a set of about 100 .png images representing the evolution of the system I am studying: how do I create a video out of these images with Mathematica?
7
votes
1answer
88 views

Detect sub figures and split (automatically?)

I would like to take a large figure showing a sequence of individual plots and automatically split the into series of images showing the individual sub-plots (to be exported as animated GIF later). ...
6
votes
1answer
174 views

How to track a deformable rod in video?

I have a video of nanotubes in solution taken with a confocal laser microscope. I typically track these nanotubes with Fiesta or Fiji, but in this case, there is variation in brightness that is ...
3
votes
1answer
88 views

Convert a point in the Radon Space to a line

I need a function point2line to convert a point in the Radon Transform Space to a straight line. But I don't know the algorithm inside mathematica, I don't know ...
0
votes
1answer
64 views

How to extract specified objects from a pdf?

Is it possible to extract some information from a pdf file? I am interested in extracting the words before the squared brackets and the following word (in the image, for example, I would like to ...
0
votes
1answer
53 views

Image matching and transformation

I hope this picture can help me to be clearer. The triangles represent some values of an image (EDITED: positions). The same for the circles, but from a different image. Some values matches, some ...
3
votes
1answer
40 views

Find the higher degree of similarity between images and report the points in common and the differences

I am trying to analyse due different images and find their similarities. In order to do this, I need to consider the coordinates of the pixels in both images, then select the points in common, i.e. ...
3
votes
2answers
74 views

Compare two plots by finding the minimum distance among points

I have a question about comparing the points within two plots. I would like to compare two plots and find the minimum distance among their points, in order to find the nearest/common points (i.e., ...
1
vote
0answers
49 views

Is it possible to select a number of points to highlight points in an image?

I would like to ask you how I can fix a number of points to show in a picture. In the previous post (Is it possible to get the coordinates only for the highlighted points from an image?), JimB ...
2
votes
1answer
55 views

Is it possible to keep only coloured parts in an image, removing all the rest (in greyscale)?

I would like to know if it is possible to keep only coloured parts (for example red eyes) from a b/w image, removing all the other parts not coloured (i.e. in grayscale or black and white). I was ...
1
vote
1answer
106 views

Is it possible to get the coordinates only for the highlighted points from an image?

I would like to ask you if it is possible to get the coordinates or a couple of numbers that can give me the positions of the highlights points (selected using HighlightImage function) in an image. I ...
6
votes
4answers
655 views

MaxDetect speed

What's the fastest way to find the local maxima of a 2D list? E.g. ...
1
vote
0answers
41 views

Can LearnDistribution Train and Generate Images Without Defaulting To 256x256?

In spite of anything I try it seems the ConformImages[] function nested in the LearnDistribution[] function resizes images to 256x256. If I convert an image into its "Data" representation before ...
14
votes
1answer
245 views

Tracking cells as they move under a microscope

I have a video (tiff file) of cells under a microscope and I'd like to segment and track the location and sizes of them across time: It has a hundred frames: I've uploaded it here (now it is public):...
5
votes
0answers
85 views

Recognising people from photos

I have a large number (probably 10000) of personal photos taken over the last few years, a good proportion of which contain family members. I'd like to put together a photo book of one family member,...
1
vote
0answers
58 views

Understanding how ComponentMeasurements finds neighbors

I am trying to understand how the module ComponentMeasurements in Mathematica works when the property Neighbors is called in ...
6
votes
1answer
105 views

Is there a SubImageApply?

Given an image and a subimage (as a rectangle or pixel ranges): img = ExampleData[{"TestImage", "Lena"}]; f = FindFaces[img]; HighlightImage[img, f] How would ...
5
votes
3answers
152 views

Including the actual length scale of the image in processing microscopic images

Following the wonderful methodologies provided in this post, I have learned how to process microscopic images of the types shown below in order to analyze them. When it comes to analysing the size ...
6
votes
1answer
396 views

Get date and time when photo was taken

I am trying to rename few images by their date and time taken. Is there a way to get the date and time when photo was taken using Mathematica?
1
vote
1answer
52 views

Why ImportByteArray when generate image from bytes

I was trying to generate an image from a list of bytes so I only had to Import an Image once as I want to store a Base64Encoded ...
19
votes
2answers
596 views

Creating graph out of particles images

I have recently started learning how to use Mathematica's brilliant image processing tools, and the image I've taken as first example is the following (source): So far I've tried to first use ...
6
votes
4answers
164 views

How to count the overlapped disks in a picture?

I have several picture containing many small circles. I can manually count the circles in these pictures but it will be time-consuming and make me tired. How can I use mathematica to do this job? I ...
0
votes
0answers
44 views

MorphologicalTransform: What is the difference between EndPoints and SkeletonEndPoints?

What is the difference between the "EndPoints" and "SkeletonEndPoints" functions of ...
1
vote
1answer
145 views

How to animate a cube with images on their faces?

From this code, how could I animate (speed given by the user) this cube at random so that each face shows me a different image. EDIT(The idea is that the cube rotates at random and shows different ...
2
votes
1answer
85 views

Segmenting cells from a stained image of cells from microscope

I have an image which has stained cells and I have to segment all the cells. But the problem is that the cell boundary is not very distinguished where there is staining done because of the stain. ...
2
votes
1answer
94 views

Calculate the surface area of different elements in a picture (micrograph)

This is a micrograph of a hybrid material that contains glass fiber (small white dots), carbon fibers (big grey dots) and a matrix that contains everything! I would like to calculate the surface area (...
0
votes
0answers
32 views

How to run image manipulation function to an array of images?

I have multiple images imported into an array. My issue begins with using this array for an image manipulation function such as Inpaint. Inpaint only accepts a single image at a time. Here's how I ...
2
votes
2answers
108 views

Find Probability that Image Is Text

I can find out whether an image is text: ImageInstanceQ[img,Entity["Concept", "TextualMatter::m7642"]] And if an image is most likely text, I can find out the ...
8
votes
2answers
214 views

Removing horizontal noise artefacts from a (SEM) image

I've been trying to analyse some SEM images to determine grain areas and sizes. Some of my images (I've attached an example below) appear to have horizontal bands that manifest as regions with ...
26
votes
2answers
1k views

How to project 3d image in the planes xy, xz, yz?

Some idea of how to do something similar to the image, but with any 3d object
2
votes
1answer
104 views

Plotting large scale image embeddings

I'm looking for help making publication-quality graphics for visualizing 2D embeddings of image datasets, so that they look like this: These two-dimensional embeddings of thumbnails (sometimes with ...
0
votes
0answers
46 views

How to assign an image to all the 12 faces of a Dodecahedron [duplicate]

How do i assign an image to all of the 12 faces of a Dodecahedron?
6
votes
2answers
290 views

Image processing: Removal of two spots in fundus images

I have many hundreds fundus images of the human eye. The yellow arrow points to two spots which I I want to remove. The final result should be a perfect circle. The removed area should be ...