4
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I was trying to plot a simple $n\times3$-sized $(x_i,y_i,z_i)$ matrix data with ListPlot3D, which is basically three lines along $y$-direction. However, the middle part is completely lost and there seems other distortion as well. It doesn't occur when I check with ListPlot for each of the three lines.enter image description here

ListPlot3D[ha, PlotRange -> All, Mesh -> All, 
 AxesLabel -> {"x", "y", "z"}, ImageSize -> Large]

And the data

ha = {{0.`, 0.`, 1.000000000000001`}, {0.`, 0.04220866428763286`, 
    1.000000000000001`}, {0.`, 0.16116035455278002`, 
    1.0000000000000013`}, {0.`, 0.3568550707954415`, 
    1.000000000000001`}, {0.`, 0.6292928130156172`, 
    1.000000000000001`}, {0.`, 0.9784735812133072`, 
    1.0000000000000009`}, {0.`, 1.4043973753885115`, 
    1.000000000000001`}, {0.`, 1.9070641955412304`, 
    1.000000000000001`}, {0.`, 2.486474041671463`, 
    1.000000000000001`}, {0.`, 3.1426269137792096`, 
    1.0000000000000009`}, {0.`, 3.8755228118644713`, 
    1.0000000000000007`}, {0.`, 4.685161735927248`, 
    1.0000000000000002`}, {0.`, 5.571543685967537`, 
    0.9999999999999999`}, {0.`, 6.534668661985342`, 
    0.9999999999999993`}, {0.`, 7.574536663980662`, 
    0.9999999999999986`}, {0.`, 8.691147691953493`, 
    0.9999999999999974`}, {0.`, 9.884501745903842`, 
    0.9999999999999963`}, {0.`, 11.154598825831703`, 
    0.9999999999999954`}, {0.`, 12.501438931737077`, 
    0.9999999999999949`}, {0.`, 13.925022063619968`, 
    0.9999999999999942`}, {0.`, 15.425348221480373`, 
    0.9999999999999936`}, {0.`, 17.002417405318294`, 
    0.9999999999999928`}, {0.`, 18.656229615133725`, 
    0.9999999999999922`}, {0.`, 20.386784850926674`, 
    0.9999999999999916`}, {0.`, 22.194083112697136`, 
    0.999999999999991`}, {0.`, 24.07812440044511`, 
    0.9999999999999905`}, {0.`, 26.038908714170606`, 
    0.99999999999999`}, {0.`, 28.076436053873604`, 
    0.9999999999999896`}, {0.`, 30.190706419554125`, 
    0.9999999999999892`}, {0.`, 32.381719811212164`, 
    0.999999999999989`}, {0.`, 34.6494762288477`, 
    0.9999999999999887`}, {0.`, 36.99397567246076`, 
    0.9999999999999886`}, {0.`, 39.41521814205134`, 
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    0.9999999999999883`}, {0.`, 49.86761828018879`, 
    0.9999999999999885`}, {0.`, 52.67257587966694`, 
    0.9999999999999885`}, {0.`, 55.55427650512259`, 
    0.9999999999999887`}, {0.`, 58.512720156555766`, 
    0.999999999999989`}, {0.`, 61.54790683396646`, 
    0.9999999999999892`}, {0.`, 64.65983653735468`, 
    0.9999999999999895`}, {0.`, 67.84850926672038`, 
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    0.9999999999999901`}, {0.`, 74.45608380338437`, 
    0.9999999999999905`}, {0.`, 77.87498561068263`, 
    0.9999999999999907`}, {0.`, 81.37063044395842`, 
    0.9999999999999932`}, {0.`, 84.94301830321169`, 
    0.9999999999999886`}, {0.`, 88.59214918844249`, 
    0.9999999999999765`}, {0.`, 92.31802309965083`, 
    1.0000000000004379`}, {0.`, 96.12064003683665`, 
    1.0000000000025797`}, {0.`, 100.`, 1.0000000000017453`}, {0.001`, 
    0.`, 0.9851456965785419`}, {0.001`, 0.04220866428763286`, 
    0.9807978862177816`}, {0.001`, 0.16116035455278002`, 
    0.9701113707294763`}, {0.001`, 0.3568550707954415`, 
    0.9551775783456566`}, {0.001`, 0.6292928130156172`, 
    0.938966241440333`}, {0.001`, 0.9784735812133072`, 
    0.9251572107453561`}, {0.001`, 1.4043973753885115`, 
    0.9164358919538024`}, {0.001`, 1.9070641955412304`, 
    0.9134215526191046`}, {0.001`, 2.486474041671463`, 
    0.9150120137733051`}, {0.001`, 3.1426269137792096`, 
    0.9194496552196791`}, {0.001`, 3.8755228118644713`, 
    0.9251679949629803`}, {0.001`, 4.685161735927248`, 
    0.9311110359028776`}, {0.001`, 5.571543685967537`, 
    0.9366974449748587`}, {0.001`, 6.534668661985342`, 
    0.9416642637206076`}, {0.001`, 7.574536663980662`, 
    0.9459077703484071`}, {0.001`, 8.691147691953493`, 
    0.9492727960322465`}, {0.001`, 9.884501745903842`, 
    0.9496894601285651`}, {0.001`, 11.154598825831703`, 
    0.9444346395454216`}, {0.001`, 12.501438931737077`, 
    0.9380124889601578`}, {0.001`, 13.925022063619968`, 
    0.930814905086062`}, {0.001`, 15.425348221480373`, 
    0.9227876161420403`}, {0.001`, 17.002417405318294`, 
    0.9138395812502855`}, {0.001`, 18.656229615133725`, 
    0.9038615966962887`}, {0.001`, 20.386784850926674`, 
    0.8927270336346949`}, {0.001`, 22.194083112697136`, 
    0.8802896371980299`}, {0.001`, 24.07812440044511`, 
    0.8663800048610383`}, {0.001`, 26.038908714170606`, 
    0.8508008043504566`}, {0.001`, 28.076436053873604`, 
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    5.372616958607281`*^-16}, {0.001`, 96.12064003683665`, 
    1.3462554804969502`*^-119}, {0.001`, 100.`, 
    9.396462133027396`*^-17}, {0.002`, 0.`, 
    0.9702854194086491`}, {0.002`, 0.04220866428763286`, 
    0.9615799650874828`}, {0.002`, 0.16116035455278002`, 
    0.9401603623570034`}, {0.002`, 0.3568550707954415`, 
    0.910139922530339`}, {0.002`, 0.6292928130156172`, 
    0.8773792041918361`}, {0.002`, 0.9784735812133072`, 
    0.8492795318523028`}, {0.002`, 1.4043973753885115`, 
    0.8314175647052442`}, {0.002`, 1.9070641955412304`, 
    0.8252191223825608`}, {0.002`, 2.486474041671463`, 
    0.8284882720732185`}, {0.002`, 3.1426269137792096`, 
    0.8375951953414753`}, {0.002`, 3.8755228118644713`, 
    0.8492937637750858`}, {0.002`, 4.685161735927248`, 
    0.8614112641110805`}, {0.002`, 5.571543685967537`, 
    0.8727670039728884`}, {0.002`, 6.534668661985342`, 
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    0.8884740950975214`}, {0.002`, 12.501438931737077`, 
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    0.8608453837805503`}, {0.002`, 15.425348221480373`, 
    0.8444696050275246`}, {0.002`, 17.002417405318294`, 
    0.8261211194573721`}, {0.002`, 18.656229615133725`, 
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    0.7823531323815934`}, {0.002`, 22.194083112697136`, 
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    0.6086901588358097`}, {0.002`, 32.381719811212164`, 
    0.5554510907737478`}, {0.002`, 34.6494762288477`, 
    0.49113879517423953`}, {0.002`, 36.99397567246076`, 
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    1.2923868774029326`*^-49}, {0.002`, 55.55427650512259`, 
    1.5623363881240579`*^-13}, {0.002`, 58.512720156555766`, 
    8.20616019091291`*^-72}, {0.002`, 61.54790683396646`, 
    1.9387838158153854`*^-83}, {0.002`, 64.65983653735468`, 
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    1.4018676559249928`*^-107}, {0.002`, 71.11392502206361`, 
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    1.8814412334525443`*^-33}, {0.002`, 77.87498561068263`, 
    2.4699959562643973`*^-36}, {0.002`, 81.37063044395842`, 
    8.528212719579378`*^-159}, {0.002`, 84.94301830321169`, 
    4.0595031104357706`*^-172}, {0.002`, 88.59214918844249`, 
    1.2652311634065102`*^-185}, {0.002`, 92.31802309965083`, 
    2.63650817206882`*^-199}, {0.002`, 96.12064003683665`, 
    1.3352789152157276`*^-27}, {0.002`, 100.`, 
    2.0318155449586684`*^-29}};
$\endgroup$
  • $\begingroup$ Trying to rotate the figure causes my FrontEnd to hang... $\endgroup$ – Sjoerd C. de Vries Feb 9 at 21:22
  • $\begingroup$ it has to do to how some of your data are aligned I think. Try adding this option and see if it helps MaxPlotPoints -> Length[ha] $\endgroup$ – Nasser Feb 9 at 21:43
  • $\begingroup$ @Nasser With that option, It's still wrong and incomplete in a different way, as one can see from plotting each lines. $\endgroup$ – xiaohuamao Feb 9 at 22:31
  • $\begingroup$ @SjoerdC.deVries Weird... Not a large data set at all. $\endgroup$ – xiaohuamao Feb 9 at 22:32
  • $\begingroup$ @xiaohuanmao, can you explain where these numbers are from? $\endgroup$ – boobami Feb 10 at 19:09
2
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Not certain what is going on but you can work around with Interpolation.

ifoo = Interpolation[ha, InterpolationOrder -> 1];

Show[
 ListPointPlot3D[ha, 
  PlotRange -> All, 
  AxesLabel -> {"x", "y", "z"}, 
  ImageSize -> Large],
 Plot3D[ifoo[x, y], 
  Evaluate[Sequence @@ MapThread[Prepend, {ifoo["Domain"], {x, y}}]], 
  PlotStyle -> Opacity[.5], 
  MeshFunctions -> {#3 &}]
 ]

Mathematica graphics

You should send your example to Wolfram Support as I think it should work with the InterpolationOrder option of ListPlot3D but that does not appear to change the plot. Would like to know what they come up with.

Hope this helps.

$\endgroup$

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