Timeline for Error when importing XML - XMLGetString::pserr: MalformedURLException
Current License: CC BY-SA 3.0
15 events
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| Jan 18, 2021 at 15:28 | answer | added | Ruben | timeline score: 1 | |
| Oct 14, 2015 at 14:38 | history | edited | user1496710 | CC BY-SA 3.0 |
edited body
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| Oct 14, 2015 at 14:37 | comment | added | user1496710 |
Thanks Marco. It's strange, I am getting the same error. I actually made a little mistake in what I copy/pasted to you, it should be retmode instead of rettype: In[171]:= Import["eutils.ncbi.nlm.nih.gov/entrez/eutils/… During evaluation of In[171]:= XMLParserXMLGet::prserr: MalformedURLException: The URL used an unsupported protocol at Line: 2 Character: 99 in /var/folders/ll/cl5jhpqx40s__jv4_blwsq5h0000gn/T/m000009227691/efetch.fcgi. >> During evaluation of In[171]:= Import::fmterr: Cannot import data as XML format. >>
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| Oct 14, 2015 at 13:44 | history | edited | MarcoB | CC BY-SA 3.0 |
Formatted code
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| Oct 14, 2015 at 13:43 | comment | added | MarcoB |
I receive no errors and your code works fine on my computer (MMA 10.2, Win7-64). If the problem persists on your end, you could also try using Import directly: Import["http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=protein&id=8&rettype=xml", "XML"] which seems to produce the same results.
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| Oct 14, 2015 at 11:30 | comment | added | user9660 | Welcome to Mathematica.SE! 1) As you receive help, try to give it too, by answering questions in your area of expertise. 2) Take the tour and check the faqs! 3) When you see good questions and answers, vote them up by clicking the gray triangles, because the credibility of the system is based on the reputation gained by users sharing their knowledge. Also, please remember to accept the answer, if any, that solves your problem, by clicking the checkmark sign! | |
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| Oct 14, 2015 at 11:12 | history | asked | user1496710 | CC BY-SA 3.0 |