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Jan 13, 2019 at 12:32 comment added Henrik Schumacher @Carl Lange Good idea. This take nicely care of the mess in the lower left corner. Several disks around the image boundaries get lost, though. Anyways, feell free to post your own solution. This question is definitely about some filtering and parameter tweaking for which I don't find time at the moment.
Jan 13, 2019 at 12:09 comment added Carl Lange This will work better if you ImageResize smaller and then MorphologicalBinarize. I get nice results with MorphologicalGraph[MorphologicalBinarize[ImageResize[i, 250]]]. (Try varying the amount to resize by also)
Jan 13, 2019 at 11:58 history answered Henrik Schumacher CC BY-SA 4.0