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You should consider using the sandbox functionality. You can create a subkernel and put it in sandbox mode this way: link = LinkLaunch[First[$CommandLine]<> " -wstp -noicon"]; LinkWrite[link, Unevaluated@EvaluatePacket[Developer`StartProtectedMode[]]]; You can then interact with this subkernel using the standard LinkWrite and LinkRead functions. If ...

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