Questions on optimizing Mathematica code for higher performance. This may mean faster execution, lower memory usage or both. Not to be confused with mathematical optimization.
2
votes
1answer
235 views
Reading in Huge Text Files
I would like to read in really large text files (about 2GB) into Mathematica. The structure of the file is such that the first row and the first column are text i.e strings. Rest is all numbers. Is it ...
15
votes
0answers
350 views
Fast Spherical Harmonics radiative transfer
This is a rather specific question and I apologize for spamming you with some lengthy code. But it could be interesting for some reader and maybe you can help out, so please bear with me.
I am using ...
8
votes
0answers
178 views
Using Compile to speed up Function with PermutationProduct
I have the following fairly simple routine dot involving PermutationProduct that I wish to speed up using ...
6
votes
0answers
143 views
Faster simplification of linear combinations of some specific functions
After some profiling I've found that my program spends most of its time in the simplification step. The program uses my simplification function many times (over different data). My calculation is not ...
6
votes
0answers
217 views
Optimizing NIntegrate for higher PrecisionGoal
By default, NIntegrate works with MachinePrecision and its PrecisionGoal is set to ...
5
votes
0answers
127 views
5
votes
0answers
105 views
Parallelizing is much slower than single kernel evaluation?
Starting with a vector of matrices, tVec, I would like to parallelize the multiplication of each element with the same matrix ...
5
votes
0answers
76 views
Compiled function crashes kernel when trying to list over different length arguments
I'm trying to speed up a tally/binning operation that I have to run many times.
I have many lists of between 1 and 10 numbers from the range [1,5] and I want to ...
4
votes
0answers
95 views
Speeding up multilinear PRA branch-and-bound algorithm with worst-case exponential time scenario with respect to basic events
The algorithm is a branch-and-bound algorithm that calculates dominances for PRA, probalistic risk assessment. The task was to find faster ways to do it in numerical software such as Matlab but we ...
2
votes
0answers
13 views
2
votes
0answers
109 views
MathKernel.exe capped to use only 13% of CPU?
I am using a Windows machine with 8 cores. No other process than Mathematica 8 is using CPU time right now - still the MathKernel.exe CPU usage does not go beyond 13%. My current computation takes ...
2
votes
0answers
97 views
Is there documentation on the comparative performance of Mathematica functions?
Recently I have been solving some Project Euler problems. I find there are always several ways to do the same thing. For example, one could join two lists like this:
...
2
votes
0answers
137 views
FindRoot - Speed and errors
I am using FindRoot[] to solve a complicated equation. It seems I get the correct answer even though I get errors about an ...
1
vote
0answers
11 views
How to create internally optimized expression for computing with high WorkingPrecision?
I have large dataset and need to fit rather complicated function on it with different values of one of its parameters (this parameter must be fixed in every fit). I use the ...
1
vote
0answers
53 views
Significant platform-dependent efficiency when importing data?
I'm curious, as I understand that answer this way:
If you are using a Linux derivative or something like cygwin on
Windows, then this is an efficient solution for reading only the third
field ...
1
vote
0answers
150 views
Faster GCD Implementation
Is there any chance to write a faster GCD than the built-in one in Mathematica?
@Mr.Wizard has written one in this question (although it's not for this purpose) which is 6 times slower on a 100k ...
1
vote
0answers
165 views
Vector computation instead of iterating over a list
I am 'Map'ping over a list. I would like to do the computation in one single iteration. Is it possible? Can 'Apply' be used here? In what way is it different from 'Map' especially in this case?
...
0
votes
0answers
86 views
Speeding up a for loop by removing a Sum command
I am attempting to create an array that has of order 1000 x 1000 entries. In the entry of the last column of each row, I have to carry out a sum that could contains 100s of terms (I only used 40 here ...
0
votes
0answers
84 views
Speeding up numerical computations
So, after seeing this and this post, I was thinking whether there were any general rules for speeding up numerical computations (not only NIntegrate or ...
0
votes
0answers
64 views
Complex Integration Optimization
The following code culminates in plots calculated for each value of t as given below.
I have tried compiling one of the functions and adjusting the precision of both the integration and the plotting ...
0
votes
0answers
108 views
A simple For loop visibly slowing down. Advice to fix?
I have run into a unique problem. I am going to try and describe my code and what is happening as understandably as possible.
I have a For loop that does the same set of calculations over and over ...
0
votes
0answers
135 views
Best Parallel Kernel Configuration
I wrote a code snippet which counts prime numbers in any given interval because the built-in PrimePihas a limited bounds.
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