Questions on the manipulation of matrices in Mathematica.

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0
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1answer
101 views

Solving symbolic matrix equation

I have this equation, $$f(x)=Ax-diag(x)(Ax+b)$$, where $x\in \mathbb{R}^n$, $A\in \mathbb{R}^{n\times n}$ and $b\in \mathbb{R}^n$, for which I need to find the zeros. $x=0$ is an obvious solution, ...
0
votes
1answer
223 views

Symbolic Jacobian computation

I have an equation for which I would like to compute the Jacobian symbolically. $$f(x)=Ax-diag(x)(Ax+b)$$, where $x\in \mathbb{R}^n$, $A\in \mathbb{R}^{n\times n}$ and $b\in \mathbb{R}^n$. I am new ...
2
votes
2answers
244 views

Fast randomization of a graph, while keeping the graph connected

I'm looking for a very efficient method for randomizing graph of a given size (N nodes, L links), but keeping them connected. Assume you have the adjacency matrix A of a given connected graph. You ...
1
vote
0answers
237 views

How to extract connected bipartite graph from incidence matrix

I'm trying to extract a connected bipartite graph Bconn from the a given incidence matrix B- I have a matrix representing a bipartite graph - the incidence matrix B (weighted or not is unimportant). ...
5
votes
3answers
2k views

Matrix Multiplication in context of row and column vectors

I've been looking at some matrices in Mathematica and I've noticed something very weird: They're extremely temperamental when it comes to dot products! For example, if I have the following, ...
1
vote
2answers
147 views

How to create automatically some matrices for symbolic manipulation?

I want to create in an automatic way some matrices to do symbolic calculations with them. They look like these: $$ \left( \begin{array}{cccc} a & 0 & b & 0 \\ 0 & 1 & 0 & 0 ...
8
votes
3answers
475 views

How can I complete a correlation matrix with missing values?

I would like to complete a correlation matrix with missing entries, such that the resulting matrix is positive semi-definite. Say I want to find some x and some y in the next matrix that satisfy ...
0
votes
2answers
687 views

Defining a function in terms of matrix elements

Currently trying to use elements from a matrix in defining a function however having some trouble. This is a somewhat simplified version of the problem. Say I have the matrix ...
1
vote
1answer
266 views

How Manipulating a matrix and a graphic in only one Manipulate? [closed]

I have to manipulate a matrix and graphics in one big Manipulate-Block. This way: Manipulate[Matrixform[mat],Graphics3D[]] How can I achieve that? Ok, here my ...
1
vote
4answers
179 views

Efficient replacement of conditional nested Do over elements of a matrix

I have two matrices like these: m1=Table[Random[],{i,10},{j,10}] m2=Table[Random[],{i,10},{j,10}] I want to create a new matrix in which its main diagonal ...
10
votes
3answers
452 views

Zero-dimensional matrices

In a recent Mathematica project, $(n \times 0)$- and $(0 \times n)$-dimensional matrices have suddenly become a frustratingly common edge case for me. For instance, consider the following two ...
0
votes
1answer
122 views

Summation matrix

I have problem with summation when it is in matrices. I want to make mathematica compute this: Large X I have added dataset for as well as e. Would anyone be able to show me how to compute this in ...
1
vote
2answers
194 views

How to sort Table/Matrix including legend(Labellings)

I want to sort table including its legend for graph I have table similar to M1 M2 M3 1 5 2 3 1 4 4 2 -10 5 7 11 6 -2 1 ...
1
vote
0answers
194 views

Efficient submatrix swaps for large sparse matrix

I am implementing the 'swap' algorithm for a binary matrix to generate matrix permutations that maintain row and column totals. My problem is that my matrices are large and sparse (e.g., 19774 x 942, ...
2
votes
1answer
132 views

Decomposing a diagonal positive real matrix

I would like to 'decompose' a diagonal positive real matrix $E$ of rank $D$ onto $\sum_{i=1}^{D}c(i)N^i$: $$E = \left( \begin{array}{ccc} 0 & & & \\ & a & & \\ ...
3
votes
2answers
137 views

Select elements of a Matrix that are the same (or have certain relationship) and return their position and the element itself

I have a matrix and I want to pick the elements that are the same and return their positions and their values. It seems easy to me, but all I know is how to pick elements that satisfy certain ...
12
votes
6answers
652 views

Elegantly split a matrix into positive and negative parts?

I have a matrix $M$ of real components, and I want to split it into two matrices $M^+$ and $M^-$ of the same dimensions as $M$, where $M^+$ contains the positive components of $M$ (the remaining ...
2
votes
1answer
754 views

Calculate mean square displacements for different particles from a excel file

I have the particle movement data in the following format: ...
1
vote
1answer
110 views

Transform list of inequalities into matrix form $A\ x \leq b$

I have a list of linear inequalities, and I want to get it into the form $A\ x \leq b$; i.e., find the matrix $A$ and the vector $b$. Is there any function in Mathematica that can that can do this?
0
votes
3answers
199 views

Determinant of a random matrix consisting of integers

I am trying to implement a function that finds the determinant of a random matrix consisting of integers. This is the code I have written so far, but I am stuck. Suggestions ? I want to find a ...
0
votes
0answers
223 views

Solving for equilibrium distribution (symbolic) by matrix multiplication

I have a huge transition matrix (81x81). The matrix is too huge to paste here, so I store it in this notebook. (There are constraints on the symbols: $0<p_b<1$ and $0<p_g<1$. If further ...
1
vote
1answer
83 views

Multilpe matrix (mxm) and vector (n), wich are unequal, so get a (three dimensional matrix) mxmxn matrix

For example I have this matrix: mk = {{1, 2, 3}, {4, 5, 6}, {7, 8, 9}} and I'd like it to multiple with this: ...
0
votes
1answer
209 views

How to speed up the computation of a specific array

I am doing some calculations on superconductivity and I REALLY need to speed up the way I calculate one of my arrays. I will put the input to the matrix (of course a tiny toy model of what I am ...
4
votes
3answers
324 views

Approximate minimum degree permutation algorithm in Mathematica

In MATLAB there is a nice implementation of the so called AMD (approximate minimum degree permutation) algorithm named amd (see Online MATLAB Documentation). There is an alternative algorithm called ...
1
vote
2answers
169 views

Add a column to a matrix as a function of the other columns

I was wondering if its possible to add a column to a matrix by a formula that uses all other columns, like this: ...
0
votes
3answers
971 views

Find the number of nonzero elements

How do you find the number of elements in a matrix that are non-zero. For instance, the following matrix has 5 nonzero elements. ...
0
votes
1answer
230 views

Performing matrix multiplications with a list

I have a question in regards to PseudoInverse. I have $A$, an $n\times 2$ matrix, and when I want to compute $(A^T A)^{-1}A$, by using ...
0
votes
2answers
146 views

How to calculate expected return, row by row in matrix? [closed]

Please help me, I'm writing my project and dont know how to solve this big matrix: I have to compute return row by row: 1st row: (18.32-17.14)/17.14 ; (19.17-18.32)/18.32 .... ...
1
vote
1answer
125 views

Transpose a ragged triangular matrix and display as columns rather than rows

I have a triangular list of lists as follows: ...
13
votes
4answers
584 views

Can (compiled) matrix permanent evaluation be further sped-up?

Update II  Sample code for simulating boson-sampling experiments has been added (as an answer). This code exploits new Mathematica capabilities relating to both empirical and smooth ...
0
votes
0answers
182 views

RowReduce : Record of all the row operations for RREF

I read "for what right-hand sides $b=(a,b,c)$ does $Ax=b$ have a solution", but that question pertains to solving for the unknown vector. I'd like a record of all of the row operations required to put ...
2
votes
1answer
1k views

Is there a built-in function to find the adjoint of a matrix?

I've been looking for a function that helps me get the adjoint matrix o a given one, I found that you can get the cofactors of a matrix but only by using the "Combinatorica" package, which I couldn't ...
1
vote
0answers
187 views

matrix with IF/THEN condition

How to generate all posible matrices with some conditions on the elements? I need to make for given $n$ all $n\times n$ matrices $A=(a_{ij})$ with three conditions: I. $a_{ij}=+1$ or $0$ or $-1$. ...
13
votes
1answer
589 views

Block Matrix Algebra with Mathematica

I have come up with some BlockMatrix Algebra for Mathematica to make notations easier. I have the following: ...
3
votes
2answers
441 views

How can we multiply nested matrices?

If we have nested matrices, such as: $$ \begin{bmatrix} \begin{bmatrix} a_{1,1} & a_{1,2}\\ a_{2,1} & a_{2,2}\\ \end{bmatrix} \begin{bmatrix} ...
0
votes
2answers
297 views

How to insert trigonometric functions into matrices' vector components? [closed]

Is it possible to insert a trigonometric function into a matrix which will be able to be used dynamically, as an element of one of the vectors of the matrix? I'm trying to perform an operation like ...
5
votes
4answers
352 views

Reduce a huge low-rank matrix

I have a huge square matrix, with a lot of zero columns and zero rows: $m=\left( \begin{array}{ccccccccc} 0 & 0 & 0 & 0 & 0 & 0 & 0 & 0 & 0 \\ 0 & 0 & 0 & ...
6
votes
4answers
912 views

Check if a matrix is Positive Semidefinite

I have a question concerning the check whether a given matrix is positive semidefinite or not. In mathematica the function PositiveDefiniteMatrixQ[m] tells me ...
2
votes
2answers
263 views

Covariance of a P x M x N matrix

I have a stack of tiff files. When imported to Mathematica, they form a $P \times M \times N$ matrix, where $P$ is the number of single images in the stack, $M$ is the number of horizontal pixels and ...
1
vote
1answer
276 views

General form of a linear transformation

Let $v_1 = \begin{bmatrix} 2 \\ -1 \end{bmatrix}$ and $v_2=\begin{bmatrix} 1 \\ -1 \end{bmatrix}$ and let $A= \begin{bmatrix} 3 & 2 \\ -2 & 1 \end{bmatrix}$ be a matrix for $T\colon \Bbb ...
4
votes
1answer
161 views

Calculate the covariance of a large matrix

I have to compute the covariance of 50 very large integer matrices (2500x2000 elements). However, according to my estimation this will take around 10 days. Do you have any ideas how to speed things ...
0
votes
1answer
1k views

Best way to compute row eigenvectors

Without qualification, the term eigenvectors (of a matrix) refers to the column eigenvectors (of a matrix) and can be directly computed with Eigenvectors[]. To get ...
6
votes
1answer
275 views

Is matrix multiplication automatically done in parallel in Mathematica 9?

In good old Mathematica versions (5.2, 6.0), matrix multiplication was automatically done in parallel. For example, on an 8-core machine, define two square real matrices: ...
15
votes
1answer
317 views

Unpacked eigenvectors of complex matrices

Edit: This bug is fixed in Mathematica 10.0.0 I want to calculate eigenvectors of a Hermitian matrix. For example ...
7
votes
1answer
252 views

Limit for Matrix expression

Let's assume that $Q_0$ is $3\times 3$ matrix with $\det Q_0\neq0 $ and $$ Q_{i+1} = \frac{1}{2}\left[ Q_i+(Q_i^{-1})^T \right] $$ I need to find next limit: $\lim _{i \to +\infty}$$Q_i$. In other ...
0
votes
1answer
74 views

Issues FindRootPlot command

I've had some fun playing around with FindRootPlot for a simple system of equations: ...
2
votes
1answer
199 views

How to create a SparseArray satisfying multiple conditions on Parts and Elements of a Matrix?

I have a matrix m1 of size $3 \times 19$. Rows $1$, $2$ and $3$ represent $3$ different groups, and columns represent $4$ different blocks: block1 - columns $1$, ...
4
votes
2answers
152 views

Permutations: selecting reviewers without conflicts of interest

I would like to automate the process of selecting a number of proposal reviewers that fit a conflict of interest criterion. Let's say I have 5 reviewers and 5 applicants from 5 departments. The ...
5
votes
5answers
384 views

What is the fastest way to replace all zeros in a matrix?

In the following matrix m every 0 should be replaced with a 1: m = {{0,1,2},{5,0,3},{8,0,0}} Desired result: ...