Questions on the use of Mathematica to construct models for approximating empirical data.

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4
votes
1answer
178 views

Removing Linear drift from an oscillating data

I have an array of 800,000 data measured at 1.1s time gap. It is oscillating data but has clear linear drift. I want to remove this linear drift. But the estimates by ...
4
votes
1answer
439 views

How to get confidence bands of parameters from a fitting procedure?

I have done fitting of data points with a given model that has two parameters (A and B), using NonlinearModelFit. The result of the fit is the maximum of the ...
4
votes
3answers
92 views

Better output for NonlinearModelFit “ParameterTable”

The Standard table fo parameters of NonlinearModelFit is obtained from NonlinearModelFit[{{0, 1}, {1, 2}, {3, 3}}, a + b*x, {a, b}, x] %["ParameterTable"]] I ...
4
votes
2answers
156 views

Unable to fit function convolved with NIntegrate with FindFit even with NumericQ

I am attempting to fit to the convolution of a simple function with a Gaussian. (I realize this could be done with Convolve also, but I thought I could make it go faster this way). I am able to ...
4
votes
1answer
542 views

Fitting piecewise functions

I have several large data sets which follow the following pattern: A position is measured, a force is applied until a new equilibrium is found. I'd like to find a fit for the position, at least at the ...
4
votes
2answers
169 views
4
votes
1answer
1k views

NonlinearModelFit::cvmit: Failed to converge to the requested accuracy or precision within 100 iterations

I have got a problem in my program with NonlinearModelFit: ...
4
votes
3answers
153 views

How to fit parameters in a system of coupled differential equations

Problem description: I'm studying a chemical reaction that can be modeled by a system of coupled differential equations, and I want to use measured data to determine the parameters that appear in the ...
4
votes
1answer
274 views

Fitting numerical model to experimental data

I have diffusion equation with the initial/boundary conditions: ...
4
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1answer
342 views

Using a user defined NormFunction in FindFit or NDSolve

I would like to use a different norm instead of the 2-norm in FindFit (Mathematica 9). For example, instead of using $$\sqrt{\sum (x_{\mathrm{model}} - ...
4
votes
1answer
586 views

Why FindFit could not exactly fulfill condition?

I tried to fit some data with boundary conditions, but FindFit just could not work. Does anyone know the reason? Details: The function to be fitted is ...
4
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1answer
130 views

TimeSeriesModelFit incorrect?

I am trying to determine the optimal model for time series data (1592 observations). When I run TimeSeriesModelFit, Mathematica selects $AR(1)$ model, the estimated ...
4
votes
1answer
89 views

FindFit runs extremely slow for my Function,how do I optimize this?

My function is the first order Bessel Function, and I am basically just trying to get this to fit in a way that does not take forever. I define the function as follows, (it seems to work faster if I ...
4
votes
1answer
254 views

FindFit not giving a good fit despite good initial parameters

I'm having a problem with FindFit not giving a good fit to my data, even though the initial parameters I give look really good when plotted. The fitting function is ...
4
votes
2answers
635 views

What can I do to eliminate the error FindFit::nrjnum:?

I am testing the "Power Law with finite-time singularity" hypothesis for world population growth for a project. The data I'm using (same behaviour should also be exhibited by the stock market, thats ...
4
votes
1answer
133 views

Find GeometricTransform from 3D object external surfaces to a positional point cloud data

I am looking for another way to approach this problem. Any suggestion on how to optimize the computing speed is welcome. I have a BSplineFunction which accurately ...
4
votes
1answer
288 views

Fitting triangular function with HeavisideTheta

I have a problem fitting a triangular function (like potential vs. time in cyclic voltammetry) with a HeavisideTheta function. I just want to get used to ...
4
votes
2answers
124 views

Remove redundant parameters from equation

I have random expressions like (b1 x + b2 x)/(b3 + b4/b5 x) + Sin[b6 x] where $x$ is a variable and {b1, ..., b6} are parameters to be fitted. This expression is ...
4
votes
1answer
971 views

How does Mathematica estimate error on fit parameters?

When performing a fit using NonlinearModelFit (or any of Mathematica fitting functions, but I am particularly interested in nonlinear models), Mathematica makes a ...
4
votes
1answer
181 views

How to Use ProbabilityScalePlot with Censored Data?

I am trying to reproduce a ProbabilityScalePlot of censored data shown here (see Sample Analysis Plot). Here is my Mathematica code. First I deal with the uncensored case. ...
4
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0answers
93 views

Plots to check all assumptions of linear regression

I'm running a linear regression with LinearModelFit and would like to plot graphs to check the assumptions of linear regression: linearity, independence of the ...
4
votes
0answers
216 views

Using FindFit to fit nonlinear ODE parameters, subject to a constraint (an inverse problem) [duplicate]

Similar to this post I am finding that constraints tend to make FindFit poor at finding a good fit. However, unlike the previous post, the constraints are required ...
3
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3answers
300 views
3
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3answers
190 views

Zero-order interpolation not going fully around

Connected to this question, I want to do a zero-order interpolation of a bunch of datapoints which is periodic. The code I use is as follows: ...
3
votes
1answer
260 views

Getting slightly different results in fitting a logit model in R and Mathematica

I'm fitting some data to a Logit model in both Mathematica and R and I'm getting slightly different results. R code: ...
3
votes
2answers
341 views

fit a curve in a three dimensional space

I have a list of points of a curve in a three dimensional space, like ...
3
votes
2answers
732 views

How can I consistently get a good logistic regression fit?

I'm executing the command NonlinearModelFit[data, c/(1 + a Exp[-b x]), {a, b, c}, x] with the data being ...
3
votes
2answers
211 views

Best fit equation from a scanned image

I am trying to extract a curve from a scanned graph and find a best fit equation. For example, starting from: How could one find an equation starting from the image file ?
3
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3answers
241 views

Plot least squares curve on Linear Log Plot

I have the following Data: ...
3
votes
2answers
473 views

In a ListPlot of LinearModelFit, plot error band

This is similar to this question. The fitted line can be plotted alongside with the data with this code: Show[ListPlot[data], Plot[lm[x], {x, 0, 5}]] I would ...
3
votes
2answers
204 views

Multi-Fitting with Nonlinear model

I want to fit experimental data by the H-N model. Here is the H-N model: $$\text{EHN}(T)\text{=}\text{E$\infty $}+\frac{\text{E0}-\text{E$\infty $}}{\left(1+\left(i \omega\tau(T_g)10^{-\frac{\text{C1} ...
3
votes
2answers
72 views

PredictionBands and the presence of {0,0} point

We know from this post, that the default fitting method cannot handle data with a {0,0} point, and that there are alternative methods. But, with these alternative methods, the prediction bands ...
3
votes
1answer
129 views

Troubles with FindFit for ODE

I need to use FindFit for ODE with arbitary number of parameters. This code (from documentation) works: ...
3
votes
2answers
1k views

How to enter an equation into FindFit?

I have the equation ...
3
votes
1answer
182 views

Test Goodness of fit for FindFit

Is there any way to get an estimate of the goodness of fit from FindFit, for instance getting the final error? The documentation doesn't provide any hints, and a quick Google search didn't return any ...
3
votes
3answers
180 views

Fitting the Plot by fourier Series of either sine or cosine

I have list of data and its plot and I don't know how to fit the plot with fourier series of either sine or cosine. Full Data: ...
3
votes
1answer
318 views

Fitting one function to another

I'd like to see how close I can fit an exponential function to a cosine function in the domain of $\;-\frac{\pi}{2}$ to $\frac{\pi}{2}$ in the least squares sense. ...
3
votes
1answer
96 views

How do I test for the occurrence of an error message and act on it?

I want to see how well some curves fit a data set. If a curve doesn't fit after 100 iterations, I get the error cvmit. How do I test for and handle this error ...
3
votes
1answer
511 views

How do I draw a credible velocity vs. time graph using Locators?

This is partly a math question, partly a Mathematica question. For educational purposes, I'm making a simple demonstration to create a velocity over time graph from six locators. On the basis of ...
3
votes
1answer
104 views

How to make a diagnostic plot for the regression?

Context I am interested in LinearModelFit, and would like to make diagnostic plots using Mathematica. I cannot find them in Mathematica document center. For example, the following R program makes ...
3
votes
1answer
535 views

NonlinearModelFit returning nonsense for very simple data

In fitting the following data, if I first log transform the y-values and use LinearModelFit I get a set of parameters that fits the data: ...
3
votes
1answer
1k views

Having Trouble Fitting Complicated Exponential Function with FindFit

I am working on high pressure shock experiments and am trying to figure out a the temperature of a sample under strong shocks. I have a measure value from 4 wavelengths of a pyrometer and am using a ...
3
votes
1answer
70 views

Ordinary Least Squares (OLS) with RLink

I need to calculate the parameters b0, b1 and b2 in: ...
3
votes
1answer
150 views

FindFit with parameters which are simultaneously in initial conditions

I have RLC circuit. I would like to find R and L by using FindFit, but L is in initial condition and I have problem with it. Could you help me ? ...
3
votes
1answer
149 views

Applying LinearModelFit[] to data obtained with WeatherData[]

I am trying to perform a linear regression on some weather data, but I can't seem to figure out how to perform the operation. What I have right now is this: ...
3
votes
2answers
140 views

FindFit “is not a real number” error when fitting a parametric function to the data

I am using Mathematica's FindFit function to fit a parametric solution to my data and I am getting the error ...
3
votes
1answer
268 views

FindMaximum of loglikelihood in Gaussian Process

I am trying to implement a Gaussian Process and have problems to maximize the loglikelihood because the function consists of a determinant of a matrix that is dependent of 2 variables and the product ...
3
votes
2answers
1k views

Find a best fitting curve for some data with no regular pattern

Suppose some data with no regular pattern is given, so common patterns of functions all fail to fit it. Then how can one find the best fitting curve? I believe there will be some data for which we can ...
3
votes
1answer
79 views

Saving data from NonlinearModelFit

If you use NonlinearModelFit the results are put into some sort of output package. How do you save these packages so that you can go back to them later? My particular problem is that I generating ...
3
votes
2answers
637 views

FindFit for a differential equation model with multiple variables?

I'm trying to figure out how to use FindFit with a multivariable differential equation model and data. I've successfully made it work for the one-variable version ...