Questions on the use of Mathematica to construct models for approximating empirical data.

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6
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2answers
1k views

How can I compute and plot the 95% confidence bands for a fitted logistic regression model?

I have a set of binary data that I' d like to fit a logistic regression model to and show the 95% confidence band around the fitted function. I can produce the regression model but how do I compute ...
6
votes
2answers
173 views

2D smoothing spline interpolation

Does Mathematica have 2D smoothing spline interpolation built in? I requires an interpolation method with smooth first derivatives and cubic bivariate splines fulfill this nicely. In python I would ...
6
votes
1answer
137 views

Why LinearModelFit is slower than NonlinearModelFit?

Why LinearModelFit is slower than NonlinearModelFit? ...
6
votes
1answer
985 views

Smoothing/Averaging 2D Vector Fields

I have a list of 2D vectors defined by {{x,y},{u,v}} and would like to smooth or average the vectors. For example here are 2 vector fields, the second has noise ...
6
votes
1answer
77 views
6
votes
1answer
243 views

Using Manipulate to dynamically correct the baseline of a signal

i have data with a baseline and will correct it with a polynomial fit using Manipulate to see immediatly the changes in the resulting spectrum. It works so far, but ...
6
votes
2answers
197 views

how recover lost data of coordinates from contourplot of mention data?

I have made Contour Plot for a lot of data, like this ...
6
votes
1answer
411 views

Mathematica vs Sigmaplot (Non LinearModelFit)

I asked a question in a previous post that was closed because "The title of the question is not correct and the issue here is too trivial to help anyone later". NonLinearModelFit It's possible ...
6
votes
1answer
382 views

Fix end point in smooth kernel distribution density

I am using some extreme value fitting method which results in a parametric distribution for values exceeding some threshold, all values $\geq 0$. For smaller values I'd like to use a smooth kernel ...
6
votes
2answers
551 views

Find parameters of ODEs to fit solution data

Problem How to find the initial conditions x[0],y[0] and the optimal value of parameters ...
6
votes
0answers
143 views

Implementation of Partial Least Squares (PLS)?

I'm looking for a PLS implementation for Wolfram Mathematica. I just cant seem to find any implementation for it - do you know one? In general, I'm a bit confused that there exist only so few ...
6
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0answers
221 views

Using perpendicular offsets in FindFit

I want to use perpendicular offsets in the built-in FindFit function. Are there any possible ways or do I have to code everything by myself?
5
votes
3answers
311 views

Finding exponential model from data [duplicate]

I'm trying to find an exponential model from data for a homework problem. There is an accompanying video explaining how to do the bigger problem but it omits any instructions on the step where the ...
5
votes
3answers
196 views

Looking for ideas for handling a complicated fitting problem

I have the following data: ...
5
votes
1answer
184 views

Forcing NonLinearModelFit through a point

Like the title says, is there a way to make an NLM fit pass through a specific point.
5
votes
3answers
325 views

Determing two Nonlinear model fits with 95% confidence bands from one data set

I have the following data which is postulated to have contributions from two different sources .....as can be seen from the confidence band, many points are out of the band. Question: How can I ...
5
votes
2answers
201 views

Transforming noisy multivariate data

I’ve been racking my brain all afternoon on trying to solve this… I have a set of noisy co-ordinate data data = {{x1,y1,z1}…..{xn,yn,zn}} that forms an ...
5
votes
3answers
528 views

How can I obtain a smooth curve from my data but preserve two inversion points

I have a list of data points, {x, y}, my data. When I plot them, the curve is jagged. I want to smooth the curve and preserve the two sharp corners. This is a plot ...
5
votes
1answer
285 views

LinearModelFit with millions of rows

I'd like to do a simple regression with millions of rows of (x,y) data. It seems to be too long for Mathematica. Is there a way to speed it up? It shouldn't be that hard to do, I am not sure what ...
5
votes
1answer
594 views

Does LinearModelFit perform an ordinary linear regression (least squares)?

Does LinearModelFit give an ordinary linear regression? I see lots of options, but nothing like "least squares" or OLR.
5
votes
2answers
376 views

How to find Matano plane

I have discrete collection of data points (10 to 10^4). I want to describe them by a continuous function and find a x value z, ...
5
votes
1answer
750 views

Multinomial logistic regression

Has anyone done multinomial logistic regression in Mathematica? The binomial case is essentially done on the LogitModelFit documentation page and works fine. I am ...
5
votes
2answers
2k views

In finding a logarithmic fit for some data (of the form a*Log[b*x]), WolframAlpha succeeds where Mathematica 7.0 fails, why?

I would like to fit a function of the form: $a \log(b x)$ to a set of data: ...
5
votes
1answer
418 views

Fit data with linear combinations of Cos and Sin

Recall that if $f$ is a piecewise continuous function on the interval $[-\pi, \pi]$, then the Fourier series of $f$ is $$f(x) = \sum_{n=0}^{\infty} (a_n \cos(nx) + b_n \sin(nx)).$$ See for example, ...
5
votes
1answer
1k views

How do I find the best parameter to fit my data if the model is a interpolating function?

Hi I have a question regarding to find the best parameters for my model to fit my data. I have 3 ordinary equation, and I now just picked some parameters (...
5
votes
1answer
305 views

Specify a constraint on an interval under FindMinimum

I have an interpolated function that looks like this: $\hskip1.2in$ and, based on extreme and critical points, I want to use a polynomial to approximate the function. The points in question are: ...
5
votes
2answers
573 views

Numerical Integration as Model for Nonlinear Fit

I'm trying to do a fit for parameters of a function within an integral but I'm getting errors when I try and run it. Essentially I want the following fit to work out: ...
5
votes
1answer
420 views

Time approximation of decrypting RSA algorithm

I've written a function that encrypts a text using the RSA algorithm. It then decrypts it using prime factorization, and takes the time it took to decrypt it and puts it in a vector together with the ...
5
votes
0answers
130 views

PenaltyFunction Option in NMinimize

I am curious if anybody has some experience in using the built-in Option "PenaltyFunction" in any of the numerical optimization functions like NMinimize. According to the documentation the user ...
5
votes
0answers
221 views

Problems extending NelderMeadMinimize into 2D

Update The eventual route I followed was to adapt a version of the NM-simplex written in C and link to it with MathLink. Once I've tested this out fully I'll post it here. I've been playing around ...
5
votes
0answers
79 views

Third syntax version of LogitModelFit: unexpected result of “BestFit”

The third listed syntax version of LogitModelFit allows one to specify input in a simple way: Only a design matrix (with a row of values of the explanatory input ...
5
votes
0answers
472 views

What exactly is “ParameterErrors” of NonlinearModelFit?

I am trying to get what I call a "$\chi^2$ fit". This means taking a function $f(x,p)$ of the variable $x$ with a parameter $p$ and finding the value of $p$ that minimizes the "distance" from a data ...
5
votes
0answers
664 views

Analytical model fitting

I have a special type of model fitting problem that I am trying to solve in Mathematica. Any insight how to attack it using available tools of Mathematica will be great to hear. We have a variable $$ ...
4
votes
3answers
660 views

Output of NonlinearModelFit differs from the correct result

I'm having a bad time dealing with the NonlinearModelFit in Mathematica 8, since the result given is a bit imprecise. An example is given on potential regression, ...
4
votes
1answer
825 views

NonlinearModelFit does not find a good fit

I am trying to fit my data to the following function, $$\frac{a b t \left(\log \left(\frac{-a d t+a t-1}{a d t}\right)-2\right)}{4 (a t-1)}-c$$ ...
4
votes
4answers
481 views

Estimating a distribution using binned data

I have data from which information has been irretrievably lost through binning and I am trying to find a plausible distribution from which it derives. There is an academic paper suggesting that the ...
4
votes
4answers
497 views

Remove linear trend from data

I have a large data set with 150k lines and two data columns. I noticed that there is a linear trend, which I want to remove. So, I do the following: first fit with a linear model ...
4
votes
1answer
991 views

How to make a multi-peak histogram fitting

I got a multipeak histogram from my data and want to fit it using a Gaussian Distribution function. ...
4
votes
5answers
2k views

How to plot Fit functions?

If I do something like this f[x_]:=x^2 Plot[f[x],{x,1,10}] Mathematica plots the function $f(x)=x^2$, as expected. However, ...
4
votes
2answers
457 views

Linear regression in a chosen range of points

Hi I'm absolutely newbie in Mathematica and have following problem: My list looks like {{50, 0.75}, {51, 0.76}, ..., and I want to choose a range out of my ...
4
votes
1answer
97 views

Mystifying failure of NonlinearModelFit

Fitting the following two time-series (two repeats of the same exponential growth process) ...
4
votes
1answer
395 views

How to get confidence bands of parameters from a fitting procedure?

I have done fitting of data points with a given model that has two parameters (A and B), using NonlinearModelFit. The result of the fit is the maximum of the ...
4
votes
1answer
160 views

Removing Linear drift from an oscillating data

I have an array of 800,000 data measured at 1.1s time gap. It is oscillating data but has clear linear drift. I want to remove this linear drift. But the estimates by ...
4
votes
2answers
167 views
4
votes
1answer
2k views

NonlinearModelFit::cvmit: Failed to converge to the requested accuracy or precision within 100 iterations

I have got a problem in my program with NonlinearModelFit: ...
4
votes
1answer
250 views

Fitting numerical model to experimental data

I have diffusion equation with the initial/boundary conditions: ...
4
votes
1answer
470 views

Fitting piecewise functions

I have several large data sets which follow the following pattern: A position is measured, a force is applied until a new equilibrium is found. I'd like to find a fit for the position, at least at the ...
4
votes
1answer
327 views

Using a user defined NormFunction in FindFit or NDSolve

I would like to use a different norm instead of the 2-norm in FindFit (Mathematica 9). For example, instead of using $$\sqrt{\sum (x_{\mathrm{model}} - ...
4
votes
1answer
1k views

Methods for NonlinearModelFit

I am using NonlinearModelFit for a thesis project. I get quite different results if I change the Method to LevenbergMarquardt or QuasiNewton or ConjugateGradient ...
4
votes
1answer
570 views

Why FindFit could not exactly fulfill condition?

I tried to fit some data with boundary conditions, but FindFit just could not work. Does anyone know the reason? Details: The function to be fitted is ...