Questions on constructing graphical objects using relatively complex computations relating to the mathematical structures defining those objects. Examples include convex hulls, mathematical constructions, symmetries, genuses of curves and graphs and programmatic constructions of polyhedra.

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6
votes
2answers
105 views

“The function DiscretizeGraphics is not implemented for GraphicsComplex” confusion

Why does DiscretizeGraphics seems to work on one GraphicsComplex and not the other? Here is an example that works: ...
6
votes
1answer
227 views
6
votes
1answer
156 views

Finding corresponding vertex from 3d to 2d

I have this simple 3d data points: ...
6
votes
1answer
731 views

Construct a simple mesh or tetrahedral mesh from 3D image surface

I have a 3D Y-Shape hollow tube, not so good surface. Import["http://dl.dropbox.com/u/68983831/tube02.vtk", "Graphics3D"] I tried to use following vertex data ...
6
votes
1answer
84 views

Can't plot rotated region

I was experimenting with the code from this question when I ran into another problem with regions. ...
6
votes
2answers
781 views

Calculating a minimum bounding box for a set of 3-space coordinates / spheres

I have a set of 3-space coordinates for the atoms of a molecule (I could also transform them into spheres with radii corresponding to the atoms they represent). I would like to place this molecule ...
5
votes
3answers
240 views

Point belonging to a Disk in a Cartesian Coordinate System

The image below represents a human subject fixations while observing this abstract pattern for 3 seconds. I would like to know how much time they spent looking at the actual disk. That is a red point ...
5
votes
3answers
3k views

Mathematica function intersection points with 3D grid

I need to produce a 3-dimensional equispaced grid over a given function in a way, that I can calculate intersection points of the function with the grids edges. So my first question is how to produce ...
5
votes
1answer
253 views

Imposing a Periodic Boundary Condition in Nearest Neighbour Search

I am trying to find first nearest neighbour distributions of randomly dispersed point-like objects in an infinite system. To do this I make a finite sized box unit cell with a chosen concentration of ...
5
votes
2answers
507 views

Finding concave hull for separated small clusters

Data : data3D = Import[file, "VertexData"]; Graphics3D[Point[data3D]] How to find concave polygon for separated small clusters.
5
votes
1answer
156 views

Finding an optimal overlay of two point clouds

Imagine I have two sets of points: ...
5
votes
1answer
327 views

Voronoi Diagram: Displaying site specific color in a voronoi diagram

I am using Voronoi Poligonization as a support form simulating island erosion; my data are the output of VoronoiDiagram, ...
5
votes
1answer
1k views

Delaunay Triangulation for 3D Surface Data

I want to do a Delaunay triangulation on scattered 3D surface data. Mathematica itself does it only for 2D through the command DelaunayTriangulation[], which gives ...
5
votes
1answer
166 views

Difference (or intersection) of two convex polyhedra

I have two convex polyhedra stored in the following form: a set of vertices vertices = {{x1,y1,z1},...}, a set of faces, where each face is a convex polygon ...
5
votes
1answer
171 views

Behavior of Graphics`Mesh`InPolygonQ with self-intersecting polygons

Playing around with some of the answers in the question How to check if a 2D point is in a polygon? I noticed that: Graphics`Mesh`InPolygonQ[poly,pt] Displays ...
5
votes
1answer
101 views

How to create bounded diagram plot?

I have set of points: ...
5
votes
0answers
215 views

Computing Ehrhart's polynomial for a convex polytope

Is there a Mathematica implementation for computing the Ehrhart polynomial of a convex polytope which is specified either by its vertices or by a set of inequalities? I am interested in knowing this ...
5
votes
0answers
253 views

How to compute the genus of a Graph? [closed]

What's the simplest way to compute the genus of a graph using Mathematica? I have looked for a Genus function (even in the ...
4
votes
2answers
215 views

Vectors in a spherical shell

I have written code that randomly generates a 3D vector of random magnitude. I now want to create a histogram of how many vectors lie in the concentric spherical shells (n*delta r, (n+1)delta r) ...
4
votes
4answers
207 views

Choosing $n$ equidistant points on a circle with given radius and center

I would like to have a function circle which takes two inputs: a tuple {x,y} and a real number ...
4
votes
2answers
857 views

How to process .vtk file

I want to extract the cluster of points inside 3D box, is there any way one can do this in Mathematica?
4
votes
2answers
189 views

How to use a ConvexHull as RegionFunction?

I have a set of data supported over a region in 2D. I want to use RegionPlot and ContourPlot on interpolations of my data, but want to restrict the Plots to the region over which my data is supported. ...
4
votes
1answer
210 views

ListPlot3D of a set of points in a non-convex region

I would like to plot a set of points in the same style as ListPlot3D does, but only in a non-convex region that I can specify (e.g. using a ...
4
votes
1answer
74 views

Error from BoundedDiagram

I cannot understand the meaning of the error BoundedDiagram::notuniq: BoundedDiagram requires that boundary vertices lie in unique Voronoi polygons. >> BoundedDiagram::nobd: Bounded ...
4
votes
2answers
197 views

How to measure cross sectional area of Tube

I have modified my question to a simple version. I have vertex clusters, polygons and a list of center points. Attached pts and polygons of 3d tube are: ...
4
votes
1answer
301 views

A Graphics`Mesh`ConvexHull[] peculiarity

I have been unable to explain the behavior of Graphics`Mesh`ConvexHull[] on the following (highly simplified) example: ...
3
votes
6answers
394 views

How to find the vertices of a regular tetrahedron? a dodecahedron?

My question is: how to find the coordinates of the vertices of regular tetrahedron and dodecahedron? I tried to find the coordinates of the vertices of a regular tetrahedron as the solutions of a ...
3
votes
2answers
197 views

Selecting for 2D points that are within a threshold distance of an upper- and lower-bound number of points

I have a very large set of 2D points: numberOf2DPoints = 10^6; pointList = RandomReal[{0, 1000}, {numberOf2DPoints, 2}]; I'd like to find a way to quickly ...
3
votes
1answer
628 views

Extracting polygons from 3D contour plot surface

Edit: This question turned out to be two parts so I am going to make this question about only the first part a kguler provided an excellent answer. Here is a better representation. My actual data ...
3
votes
1answer
89 views

BoundedDiagram Error

Although BoundedDiagram function worked well for a small data set, I got errors in a specific case that I cannot explain. I am sorry I am pasting here a large list ...
3
votes
1answer
224 views

How to map vertex points from the surface of a straight pipe onto 2D plane

How to map vertex points from the surface of a straight pipe onto 2D plane. The 3D surface points of the straight pipe can be found here: data Working code: ...
3
votes
1answer
91 views

Problem with PlanarGraphPlot And ConvexHull

I'm getting a lot of strange errors when using PlanarGraphPlot with a simple list of 11 points. This is using Mma 9.0.1 64-bit Mac OS X. ...
3
votes
1answer
85 views

What kind of object results from RegionIntersection function?

I'm trying to use RegionIntersection in a couple of Polygons. The polygons are the following: ...
3
votes
1answer
77 views

Why BoundedDiagram fails?

I have a set of points: ...
3
votes
0answers
151 views

How to get vertices of a polytope given by equalities and inequalities?

I have a polytope given by some equalities and inequalities, how can I get all the vertices of the polytope? If there's a way to deal with the one given by inequalities only, how can I reduce the ...
3
votes
0answers
163 views

Generating an obstacle-avoiding closed-curve with a fixed perimeter and a target area

I was wondering if there was a neat way to solve the following problem in Mathematica v9 - Provided a binarized image (where we call black pixels "obstacles" or vice versa, whichever is most ...
3
votes
0answers
317 views

How to make 3D object smooth?

This thread considers mathematical methods here to make the 3D object smooth but this question consider how to achieve the goal of smoothing a 3D object in Mathematica. I want to get smoother ...
2
votes
2answers
174 views

Finding integral points on a surface

Suppose I have a dimension formula (for a Lie algebra representation) that is as follows: $$ d(a,b) = {(a+1)(b+1)(a+b+2) \over 2} $$ Now consider the surface $F(a,b,n) = 0 = d(a,b) -n$ where $n \in ...
2
votes
2answers
359 views

Create a planar graph from a set of random points

A planar graph is a graph embedded in the plane in such a way that the edges intersect at vertices. This is an example of a planar graph: g = GridGraph[{3, 3}] ...
2
votes
1answer
333 views

How can Mathematica be used to detect an area surrounded by the most lines?

I have an array of lines that produce random shapes. These lines define edge boundaries from an array that I would like to use to reconstruct the main feature of the array. Can Mathematica find the ...
2
votes
2answers
291 views

Image processing: extracting ordered contour

Continuing the question How to extract the edge from a set of points and its answer by Simon Woods, I would like to ask if there is a way to extract the boundary of obtained as ...
2
votes
3answers
552 views

How to integrate a function over a 3D planar polygon?

I am trying to integrate a function over a planar polygon in 3D. In 2D, this is fairly straightforward, using either answer from this question (I use the second answer). If we use an equilateral ...
2
votes
1answer
80 views

Find area of polygon on a sphere from a set of latitude-longitude points

Given a list of latitude and longitudes say ...
2
votes
1answer
231 views

Bounded Voronoi Diagram

I am trying to compute a Voronoi diagram bounded by a box. In some cases, the points used to compute the diagram form a diagram such that at least two boundary points are within the same polygon. For ...
2
votes
2answers
118 views

Are there built-in functions for testing if a point lies within Graphics3D primitives?

I noticed in this question, Behavior of Graphics`Mesh`InPolygonQ with self-intersecting polygons, that Mathematica has some "psuedo-hidden" functionality for allowing one to quickly perform a winding ...
2
votes
1answer
209 views

Calculate scalar potential from electric field

Is it possible for Mathematica to solve an equation like $\nabla f(\mathbf{r}) = - \mathbf{E}(\mathbf{r})$ for $f(\mathbf{r})$? I tried ...
2
votes
1answer
68 views

How to draw a 3D convex hull of a set of points with styling

I´m trying to obtain the convex hull (with transparent faces) of a small number of points. I would like the Plot to have the points shown with small spheres numbers 1, 2, 3, ... along the axes ...
2
votes
1answer
71 views

About TetGenTetrahedralize Mesh Size

I have used TetGenTetrahedralize to generated a cubic mesh. I want that the edge size of the triangle to be 0.2, how can realized this? And What does the word "pq1.414a1" mean? inst1 = ...
2
votes
0answers
37 views

Voronoi diagram for line segments in Mathematica [duplicate]

I know that mathematica has built in functions for creating triangulations and Voronoi diagrams. However I haven't found a function that would create a Voronoi diagram for line segments. Is there a ...
2
votes
0answers
218 views

Visualising Special Relativity

Mathematica newbie learning by doing (or not so far, in this case). Problem: Special Relativity - consider two inertial frames $A$ & $A'$ in relative motion. At a time $t0$ as measured in $S$, ...